Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is flhB [H]

Identifier: 84624133

GI number: 84624133

Start: 2753994

End: 2755124

Strand: Direct

Name: flhB [H]

Synonym: XOO_2476

Alternate gene names: 84624133

Gene position: 2753994-2755124 (Clockwise)

Preceding gene: 84624132

Following gene: 84624134

Centisome position: 55.75

GC content: 64.54

Gene sequence:

>1131_bases
ATGTCCGAGTCCGAAGACGGCGGCGAGCGTACAGAGCTTCCCACCGAAAAACGTCTGCGCGAGGCCCGTGAGCAGGGCAA
CATCCCGCAGTCGCGCGAGCTGTCGACGGCGGCCGTATTCGGTGCCGGCGTGTTCGCGTTGATGGCGCTGGCCCGCGGCA
TCGGCGATGGCGCTACGGCGTGGATGAAGACCGCGCTCAGCCCGGACCCGACGATGCGCGAAAACCCGATGGCGCTGTTC
GGCCATTTCGGCGATCTGCTGCTGCAGTTGCTATGGGTGATGCTGCCGTTGATCGGCATCTGCCTGGCCGCCGGCCTGGC
CGGCCCGCTGCTGATGAGCGGCCTGCACTTTTCCGGCAAAGCGATCATGCCCGACCTCACCAAGCTCAACCCGGCCAACG
GGCTCAAGCGCATGTGGGGCAGCAATAGTCTGGCCGAGCTGGTCAAGTCGGTGCTGCGCCTGTTGTTCGTCGGCCTGGCC
GCCAGTTTCTGCATCTCCAAGAGCCTGCCTGGCTTGCGCTCGCTGGTGAGCCAGCCGCTAGAACAGGCGGTCGGCAACGG
GCTGGACTTCACCAAGAGCTTGCTGTTCTACACCGCCGGCGCACTGGTGCTGCTGGCCGCCATCGACGCGCCGTACCAGA
AGTGGAACTGGATGCGAAAGCTGAAGATGACGCGCGAAGAGATCAAGCGCGAGATGAAGGAAAGCGAGGGCAGCCCCGAA
GTGAAGGGCCGCATCCGCCAGATGCAGATGCAGATGTCGCAGCGCCAGATGATGGAAGCGGTGCCCAAGGCCGACGTGGT
CCTGATGAATCCGACCCACTACGCGGTGGCGCTCAAGTACGAAGGCGGCAAGATGCGCGCCCCGATCGTGGTGGCCAAGG
GCGTGGACGAAATGGCCTTCCGTATCCGCGAAGCGGGCGAGCAGCACCGGGTGGCCATCGTCACCGCACCGCCGTTGGCA
CGCGCCTTGTATAGGGAAGCGCAAGTCGGCAAGGAAATTCCCGTGAGACTCTATTCCGTCGTGGCCCAGGTCCTTTCCTA
CGTCTACCAGCTGCGTGGCTGGAACGGCGGCCCGATGCCGGAATTGCCCTCGCTGGAAGTGGATGAGTTCGGCAAGGGAG
CCAGCGCATGA

Upstream 100 bases:

>100_bases
AACGCCACGTGCCGCCAATGCTGTTCCGATTCCCGATTCCCGATTCCACGCACTGGAACGCCGCTTGCATCAGTTGGGCT
AATCCCCCACCGGCACCTCC

Downstream 100 bases:

>100_bases
GCGCCCAACCCGCCCCGATGAATGCCCGTCGCGTCATGGAGTTGCTGCGCAACGGCCTGGGCGCCCCGCTGGCCCTGATG
GCCATGCTGGCCATGCTGAT

Product: flagellar biosynthesis protein FlhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWMKTALSPDPTMRENPMALF
GHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLA
ASFCISKSLPGLRSLVSQPLEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE
VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIREAGEQHRVAIVTAPPLA
RALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMPELPSLEVDEFGKGASA

Sequences:

>Translated_376_residues
MSESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWMKTALSPDPTMRENPMALF
GHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLA
ASFCISKSLPGLRSLVSQPLEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE
VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIREAGEQHRVAIVTAPPLA
RALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMPELPSLEVDEFGKGASA
>Mature_375_residues
SESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWMKTALSPDPTMRENPMALFG
HFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAA
SFCISKSLPGLRSLVSQPLEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPEV
KGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIREAGEQHRVAIVTAPPLAR
ALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMPELPSLEVDEFGKGASA

Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]

COG id: COG1377

COG function: function code NU; Flagellar biosynthesis pathway, component FlhB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=367, Percent_Identity=40.0544959128065, Blast_Score=253, Evalue=2e-68,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006136
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 41155; Mature: 41024

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATA
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
WMKTALSPDPTMRENPMALFGHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGK
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAASFCISKSLPGLRSLVSQPL
CCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAF
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCEECCEEEECCHHHHHH
RIREAGEQHRVAIVTAPPLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMP
HHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ELPSLEVDEFGKGASA
CCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATA
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
WMKTALSPDPTMRENPMALFGHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGK
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAASFCISKSLPGLRSLVSQPL
CCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
EQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAF
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCEECCEEEECCHHHHHH
RIREAGEQHRVAIVTAPPLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMP
HHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ELPSLEVDEFGKGASA
CCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8002587; 11677609; 3298217 [H]