| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is flhB [H]
Identifier: 84624133
GI number: 84624133
Start: 2753994
End: 2755124
Strand: Direct
Name: flhB [H]
Synonym: XOO_2476
Alternate gene names: 84624133
Gene position: 2753994-2755124 (Clockwise)
Preceding gene: 84624132
Following gene: 84624134
Centisome position: 55.75
GC content: 64.54
Gene sequence:
>1131_bases ATGTCCGAGTCCGAAGACGGCGGCGAGCGTACAGAGCTTCCCACCGAAAAACGTCTGCGCGAGGCCCGTGAGCAGGGCAA CATCCCGCAGTCGCGCGAGCTGTCGACGGCGGCCGTATTCGGTGCCGGCGTGTTCGCGTTGATGGCGCTGGCCCGCGGCA TCGGCGATGGCGCTACGGCGTGGATGAAGACCGCGCTCAGCCCGGACCCGACGATGCGCGAAAACCCGATGGCGCTGTTC GGCCATTTCGGCGATCTGCTGCTGCAGTTGCTATGGGTGATGCTGCCGTTGATCGGCATCTGCCTGGCCGCCGGCCTGGC CGGCCCGCTGCTGATGAGCGGCCTGCACTTTTCCGGCAAAGCGATCATGCCCGACCTCACCAAGCTCAACCCGGCCAACG GGCTCAAGCGCATGTGGGGCAGCAATAGTCTGGCCGAGCTGGTCAAGTCGGTGCTGCGCCTGTTGTTCGTCGGCCTGGCC GCCAGTTTCTGCATCTCCAAGAGCCTGCCTGGCTTGCGCTCGCTGGTGAGCCAGCCGCTAGAACAGGCGGTCGGCAACGG GCTGGACTTCACCAAGAGCTTGCTGTTCTACACCGCCGGCGCACTGGTGCTGCTGGCCGCCATCGACGCGCCGTACCAGA AGTGGAACTGGATGCGAAAGCTGAAGATGACGCGCGAAGAGATCAAGCGCGAGATGAAGGAAAGCGAGGGCAGCCCCGAA GTGAAGGGCCGCATCCGCCAGATGCAGATGCAGATGTCGCAGCGCCAGATGATGGAAGCGGTGCCCAAGGCCGACGTGGT CCTGATGAATCCGACCCACTACGCGGTGGCGCTCAAGTACGAAGGCGGCAAGATGCGCGCCCCGATCGTGGTGGCCAAGG GCGTGGACGAAATGGCCTTCCGTATCCGCGAAGCGGGCGAGCAGCACCGGGTGGCCATCGTCACCGCACCGCCGTTGGCA CGCGCCTTGTATAGGGAAGCGCAAGTCGGCAAGGAAATTCCCGTGAGACTCTATTCCGTCGTGGCCCAGGTCCTTTCCTA CGTCTACCAGCTGCGTGGCTGGAACGGCGGCCCGATGCCGGAATTGCCCTCGCTGGAAGTGGATGAGTTCGGCAAGGGAG CCAGCGCATGA
Upstream 100 bases:
>100_bases AACGCCACGTGCCGCCAATGCTGTTCCGATTCCCGATTCCCGATTCCACGCACTGGAACGCCGCTTGCATCAGTTGGGCT AATCCCCCACCGGCACCTCC
Downstream 100 bases:
>100_bases GCGCCCAACCCGCCCCGATGAATGCCCGTCGCGTCATGGAGTTGCTGCGCAACGGCCTGGGCGCCCCGCTGGCCCTGATG GCCATGCTGGCCATGCTGAT
Product: flagellar biosynthesis protein FlhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWMKTALSPDPTMRENPMALF GHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLA ASFCISKSLPGLRSLVSQPLEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIREAGEQHRVAIVTAPPLA RALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMPELPSLEVDEFGKGASA
Sequences:
>Translated_376_residues MSESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWMKTALSPDPTMRENPMALF GHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLA ASFCISKSLPGLRSLVSQPLEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIREAGEQHRVAIVTAPPLA RALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMPELPSLEVDEFGKGASA >Mature_375_residues SESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATAWMKTALSPDPTMRENPMALFG HFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGKAIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAA SFCISKSLPGLRSLVSQPLEQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPEV KGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAFRIREAGEQHRVAIVTAPPLAR ALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMPELPSLEVDEFGKGASA
Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=367, Percent_Identity=40.0544959128065, Blast_Score=253, Evalue=2e-68,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 41155; Mature: 41024
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH WMKTALSPDPTMRENPMALFGHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAASFCISKSLPGLRSLVSQPL CCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAF HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCEECCEEEECCHHHHHH RIREAGEQHRVAIVTAPPLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMP HHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ELPSLEVDEFGKGASA CCCCCCHHHCCCCCCC >Mature Secondary Structure SESEDGGERTELPTEKRLREAREQGNIPQSRELSTAAVFGAGVFALMALARGIGDGATA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH WMKTALSPDPTMRENPMALFGHFGDLLLQLLWVMLPLIGICLAAGLAGPLLMSGLHFSGK HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AIMPDLTKLNPANGLKRMWGSNSLAELVKSVLRLLFVGLAASFCISKSLPGLRSLVSQPL CCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EQAVGNGLDFTKSLLFYTAGALVLLAAIDAPYQKWNWMRKLKMTREEIKREMKESEGSPE HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VKGRIRQMQMQMSQRQMMEAVPKADVVLMNPTHYAVALKYEGGKMRAPIVVAKGVDEMAF HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCEECCEEEECCHHHHHH RIREAGEQHRVAIVTAPPLARALYREAQVGKEIPVRLYSVVAQVLSYVYQLRGWNGGPMP HHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC ELPSLEVDEFGKGASA CCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002587; 11677609; 3298217 [H]