| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is flgL [H]
Identifier: 84624095
GI number: 84624095
Start: 2710896
End: 2712101
Strand: Direct
Name: flgL [H]
Synonym: XOO_2438
Alternate gene names: 84624095
Gene position: 2710896-2712101 (Clockwise)
Preceding gene: 84624094
Following gene: 84624096
Centisome position: 54.87
GC content: 63.52
Gene sequence:
>1206_bases ATGACCGACCGTATCTCTACCAGCATGATGTACAGCCAATCGGTGGCCTCGATGGGCGCCAAGCAGGCGCGGCTGAACCA GATCGAGGCCCAACTCGGCAGTGGGCAGCGCTTGGTCACGGCCAAGGACGACCCGGTCGCCGCAGGCACCGCGGTCGGTC TGGATCGCGCCCTGGCGGCAATCACGCGTTTCGGCGAAAACGCCAACAACGTGCAGAACCGCCTCGGGCTGCAGGAAAAT GCGCTGTCGCAGGCCGGCGACAAAATGGCGCGCGTCACCGAATTGGCGGTGCAGGCCAACAATTCCTCGCTCAGCCCCGA CGACCGCAAGGCGATCGCCGCGGAGCTGACCGCCCTGCGCGACAGCATGGTGAGCCTGGCCAACAGCACCGATGGCACCG GCCGCTATCTGTTCGGCGGCACTGCCGACGGCAGCGCGCCTTTCATCAAGAGCAGTGGCAATGTCACCTACAACGGCGAC CAGACCCAGAAGCAGGTCGAAGTGGCGCCGGACACCTTTGTCAGCGACACCCTGCCCGGCAGCGAAATCTTCATGCGCAT CCGCACCGGCGACGGCACCGTGGACGCGCACGCCAACGCCGCCAACACCGGGACCGGGCTGCTGCTGGATTTCAGCCGCG ATATCAGTACCGGCAGTTGGAACGGCGCCAGCTACAGCGTGCAGTTCACCGCAGCCAACACCTATGAAGTGCGCGACAGC ACCAATGCGGTTGTCAGCACCGGCACCTATAAAGAGGGCCAAGACATCAACGCAGCCGGCGTGCGCATGCGCATCAGCGG CGCGCCGGCGGTCGGCGACAGTTTCCAGATCGGCGCTTCCGGCAGCAAGGACGTGTTTTCCACCATCGACGACATGGTCG GCGCGCTGAACTCAGACACGCTGACCGCCCCGCAGAAGGCATCGATGATCAACACCTTGCAGTCGTCCATGCGCGACATC GCGCAGGCGTCGTCGAAGATGATCGATGCGCGCGCCTCCGGTGGCGCGCAGTTGTCGGCAATCGACAACGCCAACTCCTT GCTCGAATCCAACGAAGTCACGCTCAAGACCACCCTGTCGTCGATCCGCGATCTGGATTACGCCTCGGCGATTGGGCAGT ACCAACTCGAGAAGGCCTCGTTGCAGGCCGCTCAAACGATTTTTCAGCAGATGCAGTCGTCGTCGTTGTTCAACCTGATC CGCTGA
Upstream 100 bases:
>100_bases CCGCCAACATGCTGAAACTGCAGCAGGCCTACCAGGCCGCCGCACAGATGATTTCCACCGCCGACACCATGTTCCAAGCC ATCCTGGGTGCCGTACGCTG
Downstream 100 bases:
>100_bases TTGTGCCGCAGAAAACCTGGGTTTTCTTCGCTCCTGCGCGTGAGCATTTGCGCAGGCGGACGGAGTTTATTTTCCGAAAA GTTATACCAGCGCTAAACAT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTDRISTSMMYSQSVASMGAKQARLNQIEAQLGSGQRLVTAKDDPVAAGTAVGLDRALAAITRFGENANNVQNRLGLQEN ALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALRDSMVSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGD QTQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDISTGSWNGASYSVQFTAANTYEVRDS TNAVVSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDDMVGALNSDTLTAPQKASMINTLQSSMRDI AQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFNLI R
Sequences:
>Translated_401_residues MTDRISTSMMYSQSVASMGAKQARLNQIEAQLGSGQRLVTAKDDPVAAGTAVGLDRALAAITRFGENANNVQNRLGLQEN ALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALRDSMVSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGD QTQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDISTGSWNGASYSVQFTAANTYEVRDS TNAVVSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDDMVGALNSDTLTAPQKASMINTLQSSMRDI AQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFNLI R >Mature_400_residues TDRISTSMMYSQSVASMGAKQARLNQIEAQLGSGQRLVTAKDDPVAAGTAVGLDRALAAITRFGENANNVQNRLGLQENA LSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALRDSMVSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQ TQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDISTGSWNGASYSVQFTAANTYEVRDST NAVVSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDDMVGALNSDTLTAPQKASMINTLQSSMRDIA QASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLSSIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFNLIR
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=207, Percent_Identity=32.8502415458937, Blast_Score=112, Evalue=5e-26,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 42086; Mature: 41955
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRISTSMMYSQSVASMGAKQARLNQIEAQLGSGQRLVTAKDDPVAAGTAVGLDRALAA CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALR HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DSMVSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPG HHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCCCEEEECCCCHHHCCCCC SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDISTGSWNGASYSVQFTAANTYEVRDS CCEEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCEEEECCC TNAVVSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDDMVGALNSDT CCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCC LTAPQKASMINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCEEHHHHHH SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFNLIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDRISTSMMYSQSVASMGAKQARLNQIEAQLGSGQRLVTAKDDPVAAGTAVGLDRALAA CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQANNSSLSPDDRKAIAAELTALR HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH DSMVSLANSTDGTGRYLFGGTADGSAPFIKSSGNVTYNGDQTQKQVEVAPDTFVSDTLPG HHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCCCEEEECCCCHHHCCCCC SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDISTGSWNGASYSVQFTAANTYEVRDS CCEEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCEEEECCC TNAVVSTGTYKEGQDINAAGVRMRISGAPAVGDSFQIGASGSKDVFSTIDDMVGALNSDT CCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCC LTAPQKASMINTLQSSMRDIAQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTTLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCEEHHHHHH SIRDLDYASAIGQYQLEKASLQAAQTIFQQMQSSSLFNLIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8158647; 8905232; 9278503; 1447789 [H]