| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is flgK [H]
Identifier: 84624094
GI number: 84624094
Start: 2709022
End: 2710896
Strand: Direct
Name: flgK [H]
Synonym: XOO_2437
Alternate gene names: 84624094
Gene position: 2709022-2710896 (Clockwise)
Preceding gene: 162319800
Following gene: 84624095
Centisome position: 54.84
GC content: 65.55
Gene sequence:
>1875_bases ATGTCCATCATGTCCACCGGGACCAGCGCACTCATCGCCTTCCAACGGGCGTTGTCGACCGTTAGCCATAACGTCGCCAA CATCAATACCGAAGGCTACAGCCGCCAACGTGTGGAATTCGCAACACGCACGCCCACCGACATGGGCTACGCGTTCGTGG GCAATGGTGCCAAGATCACCGATGTGGGCCGGGTGGCCGACCAGCTGGCCATCTCGCGCCTGCTCGACAGCGGCGGCGAA CTCTCGCGCCTGCAGCAGCTGTCCTCGCTGTCCAACCGCGTCGATGCGCTCTACTCCAACACCGCCACCAACGTGGCCGG GCTGTGGTCGAACTTCTTCGATTCCACCAGCGCGGTGTCGTCCAACGCCTCGTCCACTGCCGAGCGCCAGAGCATGCTCG ACAGCGGCAATTCGCTGGCGACGCGCTTCAAGCAGCTCAACGGGCAGATGGACGGCCTGAGCAATGAAGTCAACAGCGGG CTGACCTCGTCGGTAGATGAGGTCAATCGCTTGACGCAGCAGATCGCCAAGCTCAACGGCACCATCGGCAGCAGTGCGCA GAACGCAGCGCCGGACATGCTCGATCAGCGCGACGCGCTGGTGAGCGAGCTGGTCGGCTACACCGGCGGTACCGCGGTGA TGCAGGACGGCGGCTTCATCAATGTTTTCACCGCCGGCGGACAAGCGCTGGTGGTCGCTACCACCTCTTCCAAGCTCACC ACCGTCGCCGACCCGTATCAGCCGACCAAGCTGCAGGTGGCGATGCAGACCCAGGGCCAGAACGTCAGCCTCAGCGCCAA CTCGCTGGGCGGGCAGATCGGCGGCCTGCTGGAATTCCGCAGCAGCGTGCTCGAGCCGACCCAGGCCGAACTCGGCCGCC TGGCCGTGGGCATGGCCAGCACCTTCAATGCCGGCCACCGCCAGGGTATGGATCTGTATGGCGCGATGGGCGGCAACTTC TTCAACATCGGTTCGCCGACCACTGCCGCCAACCCCAGCAACACCGGCAGCGCATCGCTGAGCGCCAGTTTCAGCAATAT GAGCGCGGTGGACGGCCAGAACGTCACGCTGAGTTTCGACGGCACCAATTGGAAGGCGACCAACGCCAGTACTGGCTCTG CGGTGCCGATGACCGGCACCGGCACCGCGGCCAACCCGCTGGTGCTCAATGGCGTCAGCATGGTGGTGGGTGGCACCCCG GCGAGCGGCGACAAGTTCCTGCTGCAGCCCACCGCCGGGCTGGCTGGCAGCCTGTCGGTCGCCATTACCGATCCCTCGCG CATTGCTGCGGCCACCCCGGTCAAGGCCACCGCGACGGTCGCCAACCAGGGCAGTGGCAAGATCAGCGACGTCAAGGTCA CCAATGCGCAGAACCCGGCGCTGCTGACCCCGTCGTCGGTCGAGTTCATCGACGCCAACCAGTACACCATCGATGGTGCC GGCCCGTTCGCCTACACCGCCGGGCAGACCATCAGCGCCAACGGCTGGAGCTTCGCGCTGGACGGCGCGCCCAAGGCCGG CGACACCTTCGGCGTCGGGCCGACCGGCGCCGGCTCCAGCGACAACGGCAATGCCAAATTGCTGGCCAAGATCGACGACG CCAAGGCGCTCAGCGGTGGCACGGTCACGCTCAACGGCGCGCTGTCGGGCCTGACCACGTCAGTGGGTTCGGCCGCGCGC GCAGCCAATTATTCGGCCGATGCGCAGAAGGTCATCAACGACCAGGCGCAGGCCAGCCGCGATTCGATTTCCGGCGTCAA CCTCGATGAGGAAGCCGCCAACATGCTGAAACTGCAGCAGGCCTACCAGGCCGCCGCACAGATGATTTCCACCGCCGACA CCATGTTCCAAGCCATCCTGGGTGCCGTACGCTGA
Upstream 100 bases:
>100_bases TGGCCGCCATTGGCAACGCGGCGGCCGATCTGTCCAACCGCTATGCCAGCACCGCCGAGCCGGCCGGGCTTGGCACCATC CGTCGCTGAGGTAAACGCCG
Downstream 100 bases:
>100_bases TGACCGACCGTATCTCTACCAGCATGATGTACAGCCAATCGGTGGCCTCGATGGGCGCCAAGCAGGCGCGGCTGAACCAG ATCGAGGCCCAACTCGGCAG
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISRLLDSGGE LSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSAVSSNASSTAERQSMLDSGNSLATRFKQLNGQMDGLSNEVNSG LTSSVDEVNRLTQQIAKLNGTIGSSAQNAAPDMLDQRDALVSELVGYTGGTAVMQDGGFINVFTAGGQALVVATTSSKLT TVADPYQPTKLQVAMQTQGQNVSLSANSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASTFNAGHRQGMDLYGAMGGNF FNIGSPTTAANPSNTGSASLSASFSNMSAVDGQNVTLSFDGTNWKATNASTGSAVPMTGTGTAANPLVLNGVSMVVGGTP ASGDKFLLQPTAGLAGSLSVAITDPSRIAAATPVKATATVANQGSGKISDVKVTNAQNPALLTPSSVEFIDANQYTIDGA GPFAYTAGQTISANGWSFALDGAPKAGDTFGVGPTGAGSSDNGNAKLLAKIDDAKALSGGTVTLNGALSGLTTSVGSAAR AANYSADAQKVINDQAQASRDSISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAILGAVR
Sequences:
>Translated_624_residues MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISRLLDSGGE LSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSAVSSNASSTAERQSMLDSGNSLATRFKQLNGQMDGLSNEVNSG LTSSVDEVNRLTQQIAKLNGTIGSSAQNAAPDMLDQRDALVSELVGYTGGTAVMQDGGFINVFTAGGQALVVATTSSKLT TVADPYQPTKLQVAMQTQGQNVSLSANSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASTFNAGHRQGMDLYGAMGGNF FNIGSPTTAANPSNTGSASLSASFSNMSAVDGQNVTLSFDGTNWKATNASTGSAVPMTGTGTAANPLVLNGVSMVVGGTP ASGDKFLLQPTAGLAGSLSVAITDPSRIAAATPVKATATVANQGSGKISDVKVTNAQNPALLTPSSVEFIDANQYTIDGA GPFAYTAGQTISANGWSFALDGAPKAGDTFGVGPTGAGSSDNGNAKLLAKIDDAKALSGGTVTLNGALSGLTTSVGSAAR AANYSADAQKVINDQAQASRDSISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAILGAVR >Mature_623_residues SIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKITDVGRVADQLAISRLLDSGGEL SRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSAVSSNASSTAERQSMLDSGNSLATRFKQLNGQMDGLSNEVNSGL TSSVDEVNRLTQQIAKLNGTIGSSAQNAAPDMLDQRDALVSELVGYTGGTAVMQDGGFINVFTAGGQALVVATTSSKLTT VADPYQPTKLQVAMQTQGQNVSLSANSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMASTFNAGHRQGMDLYGAMGGNFF NIGSPTTAANPSNTGSASLSASFSNMSAVDGQNVTLSFDGTNWKATNASTGSAVPMTGTGTAANPLVLNGVSMVVGGTPA SGDKFLLQPTAGLAGSLSVAITDPSRIAAATPVKATATVANQGSGKISDVKVTNAQNPALLTPSSVEFIDANQYTIDGAG PFAYTAGQTISANGWSFALDGAPKAGDTFGVGPTGAGSSDNGNAKLLAKIDDAKALSGGTVTLNGALSGLTTSVGSAARA ANYSADAQKVINDQAQASRDSISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAILGAVR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=446, Percent_Identity=33.1838565022422, Blast_Score=208, Evalue=8e-55,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 63507; Mature: 63376
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT CCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCEEEECCCCEEC DVGRVADQLAISRLLDSGGELSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSAVS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHC SNASSTAERQSMLDSGNSLATRFKQLNGQMDGLSNEVNSGLTSSVDEVNRLTQQIAKLNG CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCC TIGSSAQNAAPDMLDQRDALVSELVGYTGGTAVMQDGGFINVFTAGGQALVVATTSSKLT CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCEE TVADPYQPTKLQVAMQTQGQNVSLSANSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMAS EECCCCCCCEEEEEEECCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TFNAGHRQGMDLYGAMGGNFFNIGSPTTAANPSNTGSASLSASFSNMSAVDGQNVTLSFD HCCCCHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEC GTNWKATNASTGSAVPMTGTGTAANPLVLNGVSMVVGGTPASGDKFLLQPTAGLAGSLSV CCCEEECCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEEECCCCCCCCEEE AITDPSRIAAATPVKATATVANQGSGKISDVKVTNAQNPALLTPSSVEFIDANQYTIDGA EEECCHHHEECCCCCEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCEEEECCC GPFAYTAGQTISANGWSFALDGAPKAGDTFGVGPTGAGSSDNGNAKLLAKIDDAKALSGG CCCEEECCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC TVTLNGALSGLTTSVGSAARAANYSADAQKVINDQAQASRDSISGVNLDEEAANMLKLQQ EEEECCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AYQAAAQMISTADTMFQAILGAVR HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIMSTGTSALIAFQRALSTVSHNVANINTEGYSRQRVEFATRTPTDMGYAFVGNGAKIT CCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCEEEECCCCEEC DVGRVADQLAISRLLDSGGELSRLQQLSSLSNRVDALYSNTATNVAGLWSNFFDSTSAVS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHC SNASSTAERQSMLDSGNSLATRFKQLNGQMDGLSNEVNSGLTSSVDEVNRLTQQIAKLNG CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCC TIGSSAQNAAPDMLDQRDALVSELVGYTGGTAVMQDGGFINVFTAGGQALVVATTSSKLT CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCEE TVADPYQPTKLQVAMQTQGQNVSLSANSLGGQIGGLLEFRSSVLEPTQAELGRLAVGMAS EECCCCCCCEEEEEEECCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TFNAGHRQGMDLYGAMGGNFFNIGSPTTAANPSNTGSASLSASFSNMSAVDGQNVTLSFD HCCCCHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEC GTNWKATNASTGSAVPMTGTGTAANPLVLNGVSMVVGGTPASGDKFLLQPTAGLAGSLSV CCCEEECCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEEECCCCCCCCEEE AITDPSRIAAATPVKATATVANQGSGKISDVKVTNAQNPALLTPSSVEFIDANQYTIDGA EEECCHHHEECCCCCEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCEEEECCC GPFAYTAGQTISANGWSFALDGAPKAGDTFGVGPTGAGSSDNGNAKLLAKIDDAKALSGG CCCEEECCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC TVTLNGALSGLTTSVGSAARAANYSADAQKVINDQAQASRDSISGVNLDEEAANMLKLQQ EEEECCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AYQAAAQMISTADTMFQAILGAVR HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]