Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624034

Identifier: 84624034

GI number: 84624034

Start: 2637020

End: 2638339

Strand: Direct

Name: 84624034

Synonym: XOO_2377

Alternate gene names: NA

Gene position: 2637020-2638339 (Clockwise)

Preceding gene: 84624031

Following gene: 84624035

Centisome position: 53.38

GC content: 62.8

Gene sequence:

>1320_bases
GTGTTGAATAGGACACTGGAAGTGCGTTTTGAACAGTACGGGGAAGTAGTTGCTGCCGCCCTGTCCCATGCGGATCGCAA
ACAGCCCGCACACTGGTACCTGAAGGGGTTGCTACTGCCTGGAGGGCGCAAGAGCGTGGAGCCCATGGCCGCGCGGGTGC
ACCCGCAGAACGTGGGCTCAGCCCATCAATCGATGCACCATCTGGTGGCCGATGCCGACTGGAGCGATCAAGCGCTGCTG
GCGGCGGTGGCGGCACAGGTGCTGCCGCCCCTGAGCAGGAAGAGCACAGCGTGTCACTGGATCGTGGACGACACGGGATT
TTCAAAGAAGGGGGTGCATTCGGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTG
CCGTGAGTTTGTCGATCGCCAACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAG
GACACTGTGCGGCGCAAGAAGGCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCTATGGATCAGAT
CGACAGCGCGCTGGCGACAGGGATTGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCGAGACCCACTGGCGAG
ACCAGCTCAGCGAACGCGGCCTGCTGTACATGGTTGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCT
GCGCCCATGCCGCCAGCCAGCCCTAAGGGCGGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTC
GGTACATGAAGTCGCGCAGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGACGCAACGCTCA
GTTCGCGGTTCGCGGCGGTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGG
CCGCCGGGAGAGTCCGAGCCCCGCCACTACTGGTTCTCGACGCTACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCAC
GGCACAAGGCCGATGGCGGATTGAACGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGCA
ACTGGCGTGGTTTTCACCATCACGCCAGTCTGTGCATCGCCGCATACGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAA
AAAAACTCCGTCGCATTCAAGATGCCTGCAGTATCCAAAAGTGTCCGCCCGCGCGGGTCTGGCCCCAATGCAACGTCACC
ATCCCAACTCGATTGCCACGCTGGCCTTCGGACTGGCTAG

Upstream 100 bases:

>100_bases
CATTTTCTCCCTAATTTACTGACTTATTAGTTCCACTGTGTTACAAATAATCGTACCTTTGTGCCACTATTGGAAGACCT
TCAGGCCGCGCGGGAGAGCT

Downstream 100 bases:

>100_bases
GCTTATCGCCAGAAGCCTCCCACACTGCCCGTGTTGCGGGGTCTCACCTTACCAACGGATTCGTATTTAGTAACACAGTA
GAATTAGTAACATGTGGAGA

Product: ISXo8 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVGSAHQSMHHLVADADWSDQALL
AAVAAQVLPPLSRKSTACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ
DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP
APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEW
PPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSK
KNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG

Sequences:

>Translated_439_residues
MLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVGSAHQSMHHLVADADWSDQALL
AAVAAQVLPPLSRKSTACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ
DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP
APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEW
PPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSK
KNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG
>Mature_439_residues
MLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVGSAHQSMHHLVADADWSDQALL
AAVAAQVLPPLSRKSTACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ
DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP
APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEW
PPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSK
KNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48774; Mature: 48774

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVGS
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCCHHCCH
AHQSMHHLVADADWSDQALLAAVAAQVLPPLSRKSTACHWIVDDTGFSKKGVHSVGVARQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
YCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKT
HHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH
ALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCC
APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEE
RVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQE
EEEHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEEHHHHHH
LKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGS
HHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCC
GPNATSPSQLDCHAGLRTG
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNRTLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVGS
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCCHHCCH
AHQSMHHLVADADWSDQALLAAVAAQVLPPLSRKSTACHWIVDDTGFSKKGVHSVGVARQ
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
YCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKT
HHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH
ALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCC
APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHEE
RVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQE
EEEHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEEHHHHHH
LKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGS
HHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCC
GPNATSPSQLDCHAGLRTG
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]