| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623922
Identifier: 84623922
GI number: 84623922
Start: 2521100
End: 2521792
Strand: Direct
Name: 84623922
Synonym: XOO_2265
Alternate gene names: NA
Gene position: 2521100-2521792 (Clockwise)
Preceding gene: 84623921
Following gene: 84623926
Centisome position: 51.03
GC content: 63.2
Gene sequence:
>693_bases GTGAGCGCACCAGCGCGTCGTGCGCTGGTGCGCGAGTGGATCGCAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGAA GCGCGCACAACGGTTGTTGACACAGCGTCCCAAGGACAAACAAAAACTCTACGCCTTGCACGCACCGGAAGTGGAATGCA TGAGCAAGGGCAAGGCCCGCCAACCGTACGAATGTGGCGTCAAGGTCGGCATTGCGGTGAGTGCGCGCAAGGGCTTGATC GTGGGCGCGCGCAGTTTTCCCGGCAATCCCTACGACGGCGATACGTTGGCCGAGCACCTGGAACAGGCGCGCGGGCTGCT GCAGGATGTGGATGTGATCCCGCAGGTGGCGATTGTGGATCTGGGGTATCGCGGGCGCGACGTGGAGGGTGTGCAGATCC TGCATCGGGGCAAAGCCAAGACGCTGACACGACGGCAATGGCGCTGGATCAAACGACGGCAAGCAGTTGAGCCGGTGATC GGACATCTGAAACAGGACTGCCGCTTGAATCGCTGCCATCTCAAAGGCGCCCAAGGCGATGCACTGCACGTGCTCGGCTG CGCCGCTGGCGACAACCTGCGGTGGCTGCTGCGCTGGATCGCCTTTTTGCGTGCCTGGTTGCAGGTGGTGCGGGCGCGTT CCTCAACGCGCTCAAGCATCATGTGGCCGGCAAACATGGCATTTGGTGTTTGA
Upstream 100 bases:
>100_bases GGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGAAGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAG GATGCGCTGCAAAAACAATG
Downstream 100 bases:
>100_bases GAGGGTTTTTCAGGGGCGACTTATTAGCCGCTCTCAGCCGCTTCCAGCCCAAATCCCGCGCCTTGCGCCAGGGTGTCGAA GCCCGGAAACGACGTCGCCA
Product: ISXoo4 transposase
Products: NA
Alternate protein names: Transposase; ISXoo4 Transposase; ISXoo5 Transposase; ISPg7 Transposase; Transposase Protein; ISRSO9-Transposase Protein; Transposase IS4 Family; Isxoo4 Transposase Protein; Transposase Of Disrupted Insertion Sequence; Transposase IS5 Family; IS5 Family Transposase
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSAPARRALVREWIAGGASERCALAAKRAQRLLTQRPKDKQKLYALHAPEVECMSKGKARQPYECGVKVGIAVSARKGLI VGARSFPGNPYDGDTLAEHLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVI GHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWLLRWIAFLRAWLQVVRARSSTRSSIMWPANMAFGV
Sequences:
>Translated_230_residues MSAPARRALVREWIAGGASERCALAAKRAQRLLTQRPKDKQKLYALHAPEVECMSKGKARQPYECGVKVGIAVSARKGLI VGARSFPGNPYDGDTLAEHLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVI GHLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWLLRWIAFLRAWLQVVRARSSTRSSIMWPANMAFGV >Mature_229_residues SAPARRALVREWIAGGASERCALAAKRAQRLLTQRPKDKQKLYALHAPEVECMSKGKARQPYECGVKVGIAVSARKGLIV GARSFPGNPYDGDTLAEHLEQARGLLQDVDVIPQVAIVDLGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIG HLKQDCRLNRCHLKGAQGDALHVLGCAAGDNLRWLLRWIAFLRAWLQVVRARSSTRSSIMWPANMAFGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25698; Mature: 25567
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPARRALVREWIAGGASERCALAAKRAQRLLTQRPKDKQKLYALHAPEVECMSKGKAR CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHHHCCCCC QPYECGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEHLEQARGLLQDVDVIPQVAIVD CCHHCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE LGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGD CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC ALHVLGCAAGDNLRWLLRWIAFLRAWLQVVRARSSTRSSIMWPANMAFGV EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHCCCC >Mature Secondary Structure SAPARRALVREWIAGGASERCALAAKRAQRLLTQRPKDKQKLYALHAPEVECMSKGKAR CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCCCHHHHHCCCCC QPYECGVKVGIAVSARKGLIVGARSFPGNPYDGDTLAEHLEQARGLLQDVDVIPQVAIVD CCHHCCCEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE LGYRGRDVEGVQILHRGKAKTLTRRQWRWIKRRQAVEPVIGHLKQDCRLNRCHLKGAQGD CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCC ALHVLGCAAGDNLRWLLRWIAFLRAWLQVVRARSSTRSSIMWPANMAFGV EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA