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The map label for this gene is yedY [H]

Identifier: 84623926

GI number: 84623926

Start: 2525777

End: 2526745

Strand: Direct

Name: yedY [H]

Synonym: XOO_2269

Alternate gene names: 84623926

Gene position: 2525777-2526745 (Clockwise)

Preceding gene: 84623922

Following gene: 84623927

Centisome position: 51.13

GC content: 63.16

Gene sequence:

>969_bases
ATGTCGTTTCGCGATGCTTTCAAATTGCCGTCCAGCCAGATCACAGATGAGGCCGTTTATCGCGACCGTCGCCGGCTGCT
GCAGGTAGTGGCGTTGACCCCGGCGCTGGGCGTGGCGGGGTGTGCCGAGGCCGATCCGCCGCCTCCGCCCAAGACCGTGG
TGACGCCGGCGCAGGCGCGCAGTGGGTTTCGCACGGCTGAGGAGTTGACCCGGCTGGAAGACGTCACCAGCTACAACAAC
TTCTACGAGTTCGGTACCGACAAGACCGATCCGTCCAAGGCCGCCAAGACATTGAAGCTCTCGCCGTGGACGGTGAAGGT
GAGCGGCGAGTGCGAGAAACCGGGCAGCCTGTCGCTGGACGAACTGCTCAAGGACATCACGCCGGAGGAACGCATTTATC
GGCTGCGCTGCGTGGAAGGCTGGTCGATGGTGATCCCGTGGACGGGCGTGCCGTTGGCCGAGGTGCTCAAGCGCTTCGCG
CCGACCTCCAAGGCCAAGTACGTCGCGTTCACCACGCTGGCCGACCCACAACAGATGCCCGGCGTGCGCTACCGCTCGAT
CAACTGGCCGTACCGTGAAGGCCTGCGCATCGACGAGGCGATGCACCCACTGACCCTGCTGGCCACCGGCCTGTACGGCA
AGCCGCTACCGCAGCAGAACGGCGCGCCGTTGCGGCTGGTCGTGCCGTGGAAATATGGCTTCAAGAGCATCAAGTCGATC
GTGGAAATCCGCTTCGTCGAAAAAATGCCCGAAACCGCCTGGCACGATCTGCAACCGTCCGAATACGGCTTCTTTTCCAA
CGTCAATCCGGCGGTGGACCACCCGCGCTGGAGTCAGAAGACCGAGCGCCGCATCGCCGGCACGGCCAGCAAACTGTTCG
CCGAGCGTATCGCGACCAAACCCTTCAACGGGTACGCCGATCAGGTCGCTTCGTTGTACGCGGGCATGGATCTGAAAAAG
TGGTTCTAG

Upstream 100 bases:

>100_bases
TGCATCCTTCTGACTGAGCCTGACGTAACGTAGGCGTGCATCAAAGCGAACTTTTTTCCGGTTCGTTACTCTCACGTTGC
AGCCACCGCCGGAGCCTGCC

Downstream 100 bases:

>100_bases
GCGATGGCTCGATCCATGCGAGCTTGCATCACTGCAAGAGCGCGCTGGCGCGCGACCGGGCGTTCTACGTAGCGCCTCAT
CGCGCGCCAGCGGGCTCCTA

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSFRDAFKLPSSQITDEAVYRDRRRLLQVVALTPALGVAGCAEADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNN
FYEFGTDKTDPSKAAKTLKLSPWTVKVSGECEKPGSLSLDELLKDITPEERIYRLRCVEGWSMVIPWTGVPLAEVLKRFA
PTSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKK
WF

Sequences:

>Translated_322_residues
MSFRDAFKLPSSQITDEAVYRDRRRLLQVVALTPALGVAGCAEADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNN
FYEFGTDKTDPSKAAKTLKLSPWTVKVSGECEKPGSLSLDELLKDITPEERIYRLRCVEGWSMVIPWTGVPLAEVLKRFA
PTSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKK
WF
>Mature_321_residues
SFRDAFKLPSSQITDEAVYRDRRRLLQVVALTPALGVAGCAEADPPPPPKTVVTPAQARSGFRTAEELTRLEDVTSYNNF
YEFGTDKTDPSKAAKTLKLSPWTVKVSGECEKPGSLSLDELLKDITPEERIYRLRCVEGWSMVIPWTGVPLAEVLKRFAP
TSKAKYVAFTTLADPQQMPGVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSIV
EIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATKPFNGYADQVASLYAGMDLKKW
F

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=329, Percent_Identity=51.063829787234, Blast_Score=317, Evalue=6e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 36289; Mature: 36158

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRDAFKLPSSQITDEAVYRDRRRLLQVVALTPALGVAGCAEADPPPPPKTVVTPAQAR
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHH
SGFRTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPWTVKVSGECEKPGSLSLD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCEEEEECCCCCCCCCCCHH
ELLKDITPEERIYRLRCVEGWSMVIPWTGVPLAEVLKRFAPTSKAKYVAFTTLADPQQMP
HHHHHCCCHHHEEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHCC
GVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
CCEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATK
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PFNGYADQVASLYAGMDLKKWF
CCCCHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
SFRDAFKLPSSQITDEAVYRDRRRLLQVVALTPALGVAGCAEADPPPPPKTVVTPAQAR
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHH
SGFRTAEELTRLEDVTSYNNFYEFGTDKTDPSKAAKTLKLSPWTVKVSGECEKPGSLSLD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCEEEEECCCCCCCCCCCHH
ELLKDITPEERIYRLRCVEGWSMVIPWTGVPLAEVLKRFAPTSKAKYVAFTTLADPQQMP
HHHHHCCCHHHEEEEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHCC
GVRYRSINWPYREGLRIDEAMHPLTLLATGLYGKPLPQQNGAPLRLVVPWKYGFKSIKSI
CCEEEECCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
VEIRFVEKMPETAWHDLQPSEYGFFSNVNPAVDHPRWSQKTERRIAGTASKLFAERIATK
HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PFNGYADQVASLYAGMDLKKWF
CCCCHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]