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The map label for this gene is nodV [H]

Identifier: 84623915

GI number: 84623915

Start: 2507616

End: 2508812

Strand: Direct

Name: nodV [H]

Synonym: XOO_2258

Alternate gene names: 84623915

Gene position: 2507616-2508812 (Clockwise)

Preceding gene: 84623914

Following gene: 84623916

Centisome position: 50.76

GC content: 65.91

Gene sequence:

>1197_bases
GTGGCGGTCCATGGTGGTCGCCACCGGCACAGACACGCGAACCCGCGGCTCCATGAATCAAGCACTGCCTCCAGCGCCGG
TTGTGTAACGGCGGCGCCGCCAGCTGAGACAATCGCCGCCATGCGCCTGACCTCTCTATTCCGCTCCCCGCCCACCCGTA
CCGACCTGCTTGGCATGGTCGGCCTGGTGGCTGGCATGGCGGCGATCTTCGTTGCCGACACGTTCACCGATTACGCGGTG
GCGGCGGCCTTGTTCTATACGCTGGTGGTGCTGCTGTCGGTGCGCCTGCTCACGCGTGCGGGCGTGGTGTCCCTGGCGGC
CACCTGTCTGGCGCTGATCGTGCTCAGCTTCCATCTTACCCCGGCCGGCAGTTACCGCGTGGGCGTGATCAATTCCTGCA
TCAGCGCGGTGGTGGTGGCGGTGACCACGTACCTGGCGGTACAGATGGAAGCGGCCAAGGCCAGCGCACATGGCGCACAG
GCACGGCTGTTGCGGCTGACCCGCAGCGGCAGCATGGGTGGGCTAGCCGCATCGATCGCGCACGAAGTCAATCAACCGTT
GGCCGCCATCGTGACCAGCGGCAACGCCTGCCAGCGCTGGTTGGCGCAGCAACCGCCGAACCTGGCCAAGGCCGATGCCG
CACTGGAGCGCATGCTCGCCGACGCCGGCCGCGCCAGCGCCATCATCGCGCGCATGCGTGCGCTGGCGCGTGGCGAAGCG
AGTCAGCGCCAGCCGCTGGATTTGAACCGTACGGTGCTCGACATGATTGCGCTCACCCGAGGCGAAACCGAGCGTCATGG
CATCGCATTGTCGCTGGAGCTGGATCCTGCCCTGCCTGCAGTGCTGGCCGATGGCGTGCAGATTCAGCAGGTGATCGGCA
ATCTGTTGCTCAACGCGGTGGAGGCGCTGGCAACGGAACCGGATGAGACGCGCAGCATCCACGTGCGCTCGCATGTCGAT
GGTGCGTGGGCATGCCTGTGCATCGACGATACCGGCCCAGGTTTATCCGAGGATGCACTGGCGCATATCTTCGAAGCATT
CTGGAGCACGAAGGACGATGGCATGGGTATTGGCTTGAGCATCAGCCGCACCATCATGGAAGCCAACGGCGGGCAGATCT
GGGCCGAGCCGGCCAACGTGCGCGGTGCGCGCTTCGGCCTACGTTTGCCCTTGGTCGCGGCGGAGCGCAGGCAATGA

Upstream 100 bases:

>100_bases
CTGTTGCAGGCGCAGCAGGCCTACCAAAGCACGCAGGCGGCCACGGTCCAGGCACAAGCCGCGCGCTACACCGACACCGT
TGCGCTATACCAGGCCCTGG

Downstream 100 bases:

>100_bases
GCGAGATGGCACCGGTGGTGTATCTCATCGACGACGATGCTTCGATGCGCGCCGCACTGGAAGATCTGTTCGCCTCGGTC
GGGCTACAGGTCTGCGCATT

Product: nodulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MAVHGGRHRHRHANPRLHESSTASSAGCVTAAPPAETIAAMRLTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAV
AAALFYTLVVLLSVRLLTRAGVVSLAATCLALIVLSFHLTPAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHGAQ
ARLLRLTRSGSMGGLAASIAHEVNQPLAAIVTSGNACQRWLAQQPPNLAKADAALERMLADAGRASAIIARMRALARGEA
SQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPAVLADGVQIQQVIGNLLLNAVEALATEPDETRSIHVRSHVD
GAWACLCIDDTGPGLSEDALAHIFEAFWSTKDDGMGIGLSISRTIMEANGGQIWAEPANVRGARFGLRLPLVAAERRQ

Sequences:

>Translated_398_residues
MAVHGGRHRHRHANPRLHESSTASSAGCVTAAPPAETIAAMRLTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAV
AAALFYTLVVLLSVRLLTRAGVVSLAATCLALIVLSFHLTPAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHGAQ
ARLLRLTRSGSMGGLAASIAHEVNQPLAAIVTSGNACQRWLAQQPPNLAKADAALERMLADAGRASAIIARMRALARGEA
SQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPAVLADGVQIQQVIGNLLLNAVEALATEPDETRSIHVRSHVD
GAWACLCIDDTGPGLSEDALAHIFEAFWSTKDDGMGIGLSISRTIMEANGGQIWAEPANVRGARFGLRLPLVAAERRQ
>Mature_397_residues
AVHGGRHRHRHANPRLHESSTASSAGCVTAAPPAETIAAMRLTSLFRSPPTRTDLLGMVGLVAGMAAIFVADTFTDYAVA
AALFYTLVVLLSVRLLTRAGVVSLAATCLALIVLSFHLTPAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHGAQA
RLLRLTRSGSMGGLAASIAHEVNQPLAAIVTSGNACQRWLAQQPPNLAKADAALERMLADAGRASAIIARMRALARGEAS
QRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPAVLADGVQIQQVIGNLLLNAVEALATEPDETRSIHVRSHVDG
AWACLCIDDTGPGLSEDALAHIFEAFWSTKDDGMGIGLSISRTIMEANGGQIWAEPANVRGARFGLRLPLVAAERRQ

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=28.0172413793103, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788549, Length=232, Percent_Identity=30.1724137931034, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=27.9661016949153, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081816, Length=260, Percent_Identity=28.4615384615385, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=279, Percent_Identity=24.7311827956989, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41900; Mature: 41769

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVHGGRHRHRHANPRLHESSTASSAGCVTAAPPAETIAAMRLTSLFRSPPTRTDLLGMV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
GLVAGMAAIFVADTFTDYAVAAALFYTLVVLLSVRLLTRAGVVSLAATCLALIVLSFHLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHGAQARLLRLTRSGSMGGLAASIA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
HEVNQPLAAIVTSGNACQRWLAQQPPNLAKADAALERMLADAGRASAIIARMRALARGEA
HHHCCCCEEHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
SQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPAVLADGVQIQQVIGNLLLNAV
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHH
EALATEPDETRSIHVRSHVDGAWACLCIDDTGPGLSEDALAHIFEAFWSTKDDGMGIGLS
HHHHCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEECHH
ISRTIMEANGGQIWAEPANVRGARFGLRLPLVAAERRQ
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHCCCCC
>Mature Secondary Structure 
AVHGGRHRHRHANPRLHESSTASSAGCVTAAPPAETIAAMRLTSLFRSPPTRTDLLGMV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHH
GLVAGMAAIFVADTFTDYAVAAALFYTLVVLLSVRLLTRAGVVSLAATCLALIVLSFHLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAGSYRVGVINSCISAVVVAVTTYLAVQMEAAKASAHGAQARLLRLTRSGSMGGLAASIA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
HEVNQPLAAIVTSGNACQRWLAQQPPNLAKADAALERMLADAGRASAIIARMRALARGEA
HHHCCCCEEHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
SQRQPLDLNRTVLDMIALTRGETERHGIALSLELDPALPAVLADGVQIQQVIGNLLLNAV
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHH
EALATEPDETRSIHVRSHVDGAWACLCIDDTGPGLSEDALAHIFEAFWSTKDDGMGIGLS
HHHHCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEECHH
ISRTIMEANGGQIWAEPANVRGARFGLRLPLVAAERRQ
HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]