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The map label for this gene is arpC [H]

Identifier: 84623914

GI number: 84623914

Start: 2506187

End: 2507671

Strand: Direct

Name: arpC [H]

Synonym: XOO_2257

Alternate gene names: 84623914

Gene position: 2506187-2507671 (Clockwise)

Preceding gene: 84623913

Following gene: 84623915

Centisome position: 50.73

GC content: 67.95

Gene sequence:

>1485_bases
ATGACACACCTTCGCAGCACGTTGCTCTCAAGTGCCGTGGCGGTGTCGCTCGCCGCCTGCGCAGTCGGGCCGGACTTTCA
GCGCCCGGCTCCCCCGGCTACCCAGCGCTACACCGCCAATACGTTACCTGCAGCGACCACAGCCGCCGACGCTGCGCATG
GCGGTGCGCAACAGTTCGAGCCGGGGCAGGAAGTACCGGCCGCCTGGTGGCACGCATTCGACTCGCCACAACTCAATGCT
GTGGTGGAGCGCGCATTGCGTGCCAACCCCGATCTGCAGGCTGCCGATGCCGCGCTCCGGCAGGCGCAACAGACACTCGC
CGCGCAACGCGGTGCCTGGCTGCCGCAAGCGGATCTGCATGTGGATGCCAGCCGCCAACGCAACTCGGTGGTGCCCACGC
CAGATGCGGGCATAGACACGCCATACGCGCTACGCACCGCACAGCTCAGCGTGAGCTATACGCTGGACGTATTTGGTGGC
ACGCGGCGGCAAGTGGAAGCGGCGGGTGCGCAGGCACAGGCGCAGCGTGATCAGCGCGATGCGGCATACCTGAGTCTCAC
CGCCAACGTGGTGAACGCGGCCATTGGCGAAGCGGCCGTGCGCGCGCAACTGCAGGCTGCACGCGCGCAGGTCGCCATCG
CCGAACAGCTGTGCACGCTCACCGAACGCCAGCAGACGCTTGGCGCCGTCGGGACAGCGCAGGTACTGGCCCAACGCACT
GCGCTGGCGCAGGCGCAGGCCACAGTCCCGCCGCTGGAAAAACAGTTGGAACAACAACGTACCCTGCTCGCGATTCTGGG
CGGGCAAGTGCCGAGCGAGGCTGCGGATGAGGCGTTTACGCTGGAGACGCTGCAGCTTCCGGCACAACTGCCCTTATCGC
TGCCCTCGCAGTTGGTCGAGGGCCGGCCGGATATCCGCGCCGCCGAAGCGCAAGCGCATGCGGCCAGCGCGCTGATCGGT
GTGGCCACAGCTGCGCGCTTGCCGTCGATTACCCTCAGTGCGGCCAGCGGCGGTTCTGCGGCGAGTTTCGGGCGCATGTT
CGCGGCCGGTAATACGCAATGGTCGCTGGCCGGTAGCCTGTTGCAGCCGCTGTTCCATGGCGGTGCGCTTGCGCATCAGC
AACGGGCGGCCGAAGCCGGCTACGCGCAGGCCATGGCGCAATACCGCAGCGTGGTGTTGAACGCGTTCGGCGAGGTCTCC
AACGCGCTCACGGCGCTGCAGAGCGATGCACAGAGTCTGCGTGCCTGTGCCGATGCGCAAGCGCTAGCGGGGCGCACGCT
GGCGGTGGTGCAGGGTCAACAGGCGGCGGGCGCGGTAGGCATGGCCGATCTGTTGCAGGCGCAGCAGGCCTACCAAAGCA
CGCAGGCGGCCACGGTCCAGGCACAAGCCGCGCGCTACACCGACACCGTTGCGCTATACCAGGCCCTGGGTGGCGGTCCA
TGGTGGTCGCCACCGGCACAGACACGCGAACCCGCGGCTCCATGA

Upstream 100 bases:

>100_bases
TGGTCACCGCGACGGCGCTGACGCTGCTGTTGTTGCCATCGCTTTACTACCTGATGGAAGCCTTTGTCGCAGCGCGTCAG
GGCCGCCAGGAGACGACCGC

Downstream 100 bases:

>100_bases
ATCAAGCACTGCCTCCAGCGCCGGTTGTGTAACGGCGGCGCCGCCAGCTGAGACAATCGCCGCCATGCGCCTGACCTCTC
TATTCCGCTCCCCGCCCACC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MTHLRSTLLSSAVAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFEPGQEVPAAWWHAFDSPQLNA
VVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQRNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGG
TRRQVEAAGAQAQAQRDQRDAAYLSLTANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQVLAQRT
ALAQAQATVPPLEKQLEQQRTLLAILGGQVPSEAADEAFTLETLQLPAQLPLSLPSQLVEGRPDIRAAEAQAHAASALIG
VATAARLPSITLSAASGGSAASFGRMFAAGNTQWSLAGSLLQPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVS
NALTALQSDAQSLRACADAQALAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGGP
WWSPPAQTREPAAP

Sequences:

>Translated_494_residues
MTHLRSTLLSSAVAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFEPGQEVPAAWWHAFDSPQLNA
VVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQRNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGG
TRRQVEAAGAQAQAQRDQRDAAYLSLTANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQVLAQRT
ALAQAQATVPPLEKQLEQQRTLLAILGGQVPSEAADEAFTLETLQLPAQLPLSLPSQLVEGRPDIRAAEAQAHAASALIG
VATAARLPSITLSAASGGSAASFGRMFAAGNTQWSLAGSLLQPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVS
NALTALQSDAQSLRACADAQALAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGGP
WWSPPAQTREPAAP
>Mature_493_residues
THLRSTLLSSAVAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFEPGQEVPAAWWHAFDSPQLNAV
VERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLHVDASRQRNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGGT
RRQVEAAGAQAQAQRDQRDAAYLSLTANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQVLAQRTA
LAQAQATVPPLEKQLEQQRTLLAILGGQVPSEAADEAFTLETLQLPAQLPLSLPSQLVEGRPDIRAAEAQAHAASALIGV
ATAARLPSITLSAASGGSAASFGRMFAAGNTQWSLAGSLLQPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVSN
ALTALQSDAQSLRACADAQALAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGGPW
WSPPAQTREPAAP

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI1786785, Length=479, Percent_Identity=26.9311064718163, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI2367348, Length=453, Percent_Identity=25.3863134657837, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51179; Mature: 51047

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLRSTLLSSAVAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PGQEVPAAWWHAFDSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLH
CCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VDASRQRNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRD
ECCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEEEEECCCCHHHHHHHCHHHHHHHHHHH
AAYLSLTANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQVLAQRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAQAQATVPPLEKQLEQQRTLLAILGGQVPSEAADEAFTLETLQLPAQLPLSLPSQLVE
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEHHHHHCCCCCCCCCHHHHHC
GRPDIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAASFGRMFAAGNTQWSLAGSL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHH
LQPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQSLRACADAQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGGP
HHCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WWSPPAQTREPAAP
CCCCCCCCCCCCCC
>Mature Secondary Structure 
THLRSTLLSSAVAVSLAACAVGPDFQRPAPPATQRYTANTLPAATTAADAAHGGAQQFE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PGQEVPAAWWHAFDSPQLNAVVERALRANPDLQAADAALRQAQQTLAAQRGAWLPQADLH
CCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
VDASRQRNSVVPTPDAGIDTPYALRTAQLSVSYTLDVFGGTRRQVEAAGAQAQAQRDQRD
ECCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEEEEECCCCHHHHHHHCHHHHHHHHHHH
AAYLSLTANVVNAAIGEAAVRAQLQAARAQVAIAEQLCTLTERQQTLGAVGTAQVLAQRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAQAQATVPPLEKQLEQQRTLLAILGGQVPSEAADEAFTLETLQLPAQLPLSLPSQLVE
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEHHHHHCCCCCCCCCHHHHHC
GRPDIRAAEAQAHAASALIGVATAARLPSITLSAASGGSAASFGRMFAAGNTQWSLAGSL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCHHHHHHH
LQPLFHGGALAHQQRAAEAGYAQAMAQYRSVVLNAFGEVSNALTALQSDAQSLRACADAQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAGRTLAVVQGQQAAGAVGMADLLQAQQAYQSTQAATVQAQAARYTDTVALYQALGGGP
HHCCCEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WWSPPAQTREPAAP
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]