| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623890
Identifier: 84623890
GI number: 84623890
Start: 2469912
End: 2471690
Strand: Direct
Name: 84623890
Synonym: XOO_2233
Alternate gene names: NA
Gene position: 2469912-2471690 (Clockwise)
Preceding gene: 84623887
Following gene: 84623891
Centisome position: 50.0
GC content: 64.47
Gene sequence:
>1779_bases ATGCCCCGTTTCACCCGCCTGGCCCTGCGCCTGTTGCTGCTGACGTCCACCTCTGCCGCCCTGGCTGCCACGCCCCTGAG TACGCAGGCAGAGCGCAGCGGCTTCGTGCAGACCGGGCGCTACGATGAAGTCATTGCGCTGTGCGATGCGTTTGCGCAGC GCTCCCCCCAGGCGGTGCGTTGCATCCAGTTCGGCACCACGCCGGAAGGCCGGCCGATGAAGGCCTTGGTCGCCTCCACC AGTGGCGCGCTCGACGCCCAATCGGCCGCGCAGCAAAAACTGCCGGTGGTGTTGATCCAGGGCGGCCTCCATGCCGGCGA GATCAATGGCAAGGACGCGGGCTTTCTGGCACTGCGCGAGCTGCTCGACGGCAAGGCCGGCAAAGGCGTGCTCGACAAGC TGGTGTGGGTGTTCGTGCCGGTGTTCACCGTCGATGGGCATGAGCGCTGCGGTGCGTGGAACCGCCCCACTCAACGCGGC ACCGAGCAGATGGGCTGGCGCACCACCGCACAGAACTTCAATCTCAATCGCGACGACGTCAAGGCCGACGCGCCGGAAAT GCAGGCGATGTTGCAACTGGTGCAGCAGTGGGACCCGCTGATGTACGTGGACCTGCACGTCACCGATGGTGCCAAGTTCG AGCACGACGTGCCGGTGCAGGTGGAACCAGCGCATGCCGGCGATGCGACCTTGCAGCGCGATGGCACCCGCTGGCGCGAC GCGGTGCTTGCCGATCTGAAAAAACAGGGCTCGCTGCCGCTGCCGTATGACCCGTCGTTCGTGCACGAAGACGACCCTGG CTCCGGCTTTGCACACGATGTGTCGCCGCCGCGTTTTTCGCACGGCTATTTCCTGCTGCGCAACCGCTTCGGCATGTTGG TGGAAACGCATTCGTGGAAGGATTACCCCACGCGCGTGCGAGTCACCCGCAATGCCATCGTCTCGGTGCTGCAGCAGGCT GCACGCAACGACGCGCAGTGGCGCACCGACGCAGTGGTTGCCGATCAACGCGCCACGCACCTGGCTGGCACGTCCGAGCC GTTGAGTTTTGCGGCCGGCCCGCAAGCGCGCACGGTCGCGTTTCGTGGCTACGCGTATACGCGCACGCCGTCGCCGATTT CCGGCGCGCTGATGACGCGCTACGACGAGAGCAAACCGCAAATCTGGAAGGTACCCCTGCGCGACCAGATCAAGCCCGAT GTGGTGGTGGATGCCCCGCGCGGTGGCTATCTCGTGCCGGCGGCGCAAGCCGCCTTGGTAAGCGAAAAACTGCGCCTGCA TGGCATCGCGTTTCAGACGATCGGCAATGCAGCGGAGCGCCCGGTGCAGACCGTCCGCGCCGATACCGTCACGTTCGCGG CACGCTCCAACGAAAGCCATCAGACCGTCGAACTTAGCGGCCAGAGGCGCGATGAAACCCGCACCGTGCCGGCTGGCTCG TTGTTCGTACCGATCGCGCAACCCAAGGCACGTCTGGTAATGGCGATGCTGGAACCGCAGGCACCGGATTCGCTGCTGCA GTGGGGCTTTTTCACTACCGCGTTCGAGCGTAAGGAATACATGGAAGCCTATGTCGCCGAAGAAGTGGCGCGCGACATGC TTGCCAAAGATGACGCATTGAAGGCGCAGTTCGAACAGCGCATCGCCAGCGATTCGGACTTTGCCAAGAATCCGCAGGCA CGCCTGGAATTCTTCGCCAAGCGCCATGCATCGTGGGATGAGCGCTACCAGCTCTATCCGTTACTCCGCACCGCGCAGAC CGACTTCGCGCCCAGTTGA
Upstream 100 bases:
>100_bases CGTGGCAGGGATTGCGACAAGGCCATGATGCAGTGCAGATTGGCCTTGCACGCTGGCTCGGCTACGTTGCAGATATTTTC CTGGAACACTGGACAGCTGG
Downstream 100 bases:
>100_bases TCAGCCATTTCGGTGCCCCTCTGATTCGTTATGACCCAGCACTACAAGGACACGCCGTGCCGCAGCTTGATATGAAAACC TTTACACGCCGCCAACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxypeptidase; M14 Family Peptidase; Zinc Carboxypeptidase; Zinc Carboxypeptidase Family; Zinc Carboxypeptidase Family Protein; Peptidase Family M; Secreted Protein
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MPRFTRLALRLLLLTSTSAALAATPLSTQAERSGFVQTGRYDEVIALCDAFAQRSPQAVRCIQFGTTPEGRPMKALVAST SGALDAQSAAQQKLPVVLIQGGLHAGEINGKDAGFLALRELLDGKAGKGVLDKLVWVFVPVFTVDGHERCGAWNRPTQRG TEQMGWRTTAQNFNLNRDDVKADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVPVQVEPAHAGDATLQRDGTRWRD AVLADLKKQGSLPLPYDPSFVHEDDPGSGFAHDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRVTRNAIVSVLQQA ARNDAQWRTDAVVADQRATHLAGTSEPLSFAAGPQARTVAFRGYAYTRTPSPISGALMTRYDESKPQIWKVPLRDQIKPD VVVDAPRGGYLVPAAQAALVSEKLRLHGIAFQTIGNAAERPVQTVRADTVTFAARSNESHQTVELSGQRRDETRTVPAGS LFVPIAQPKARLVMAMLEPQAPDSLLQWGFFTTAFERKEYMEAYVAEEVARDMLAKDDALKAQFEQRIASDSDFAKNPQA RLEFFAKRHASWDERYQLYPLLRTAQTDFAPS
Sequences:
>Translated_592_residues MPRFTRLALRLLLLTSTSAALAATPLSTQAERSGFVQTGRYDEVIALCDAFAQRSPQAVRCIQFGTTPEGRPMKALVAST SGALDAQSAAQQKLPVVLIQGGLHAGEINGKDAGFLALRELLDGKAGKGVLDKLVWVFVPVFTVDGHERCGAWNRPTQRG TEQMGWRTTAQNFNLNRDDVKADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVPVQVEPAHAGDATLQRDGTRWRD AVLADLKKQGSLPLPYDPSFVHEDDPGSGFAHDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRVTRNAIVSVLQQA ARNDAQWRTDAVVADQRATHLAGTSEPLSFAAGPQARTVAFRGYAYTRTPSPISGALMTRYDESKPQIWKVPLRDQIKPD VVVDAPRGGYLVPAAQAALVSEKLRLHGIAFQTIGNAAERPVQTVRADTVTFAARSNESHQTVELSGQRRDETRTVPAGS LFVPIAQPKARLVMAMLEPQAPDSLLQWGFFTTAFERKEYMEAYVAEEVARDMLAKDDALKAQFEQRIASDSDFAKNPQA RLEFFAKRHASWDERYQLYPLLRTAQTDFAPS >Mature_591_residues PRFTRLALRLLLLTSTSAALAATPLSTQAERSGFVQTGRYDEVIALCDAFAQRSPQAVRCIQFGTTPEGRPMKALVASTS GALDAQSAAQQKLPVVLIQGGLHAGEINGKDAGFLALRELLDGKAGKGVLDKLVWVFVPVFTVDGHERCGAWNRPTQRGT EQMGWRTTAQNFNLNRDDVKADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVPVQVEPAHAGDATLQRDGTRWRDA VLADLKKQGSLPLPYDPSFVHEDDPGSGFAHDVSPPRFSHGYFLLRNRFGMLVETHSWKDYPTRVRVTRNAIVSVLQQAA RNDAQWRTDAVVADQRATHLAGTSEPLSFAAGPQARTVAFRGYAYTRTPSPISGALMTRYDESKPQIWKVPLRDQIKPDV VVDAPRGGYLVPAAQAALVSEKLRLHGIAFQTIGNAAERPVQTVRADTVTFAARSNESHQTVELSGQRRDETRTVPAGSL FVPIAQPKARLVMAMLEPQAPDSLLQWGFFTTAFERKEYMEAYVAEEVARDMLAKDDALKAQFEQRIASDSDFAKNPQAR LEFFAKRHASWDERYQLYPLLRTAQTDFAPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65579; Mature: 65448
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFTRLALRLLLLTSTSAALAATPLSTQAERSGFVQTGRYDEVIALCDAFAQRSPQAVR CCHHHHHHHHHHHHHCCCHHHEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEE CIQFGTTPEGRPMKALVASTSGALDAQSAAQQKLPVVLIQGGLHAGEINGKDAGFLALRE EEEECCCCCCCCHHHEEECCCCCCCHHHHHHHCCCEEEEECCCEECCCCCCCHHHHHHHH LLDGKAGKGVLDKLVWVFVPVFTVDGHERCGAWNRPTQRGTEQMGWRTTAQNFNLNRDDV HHCCCCCCHHHHHHHHHHHHHEEECCHHHCCCCCCCHHHCHHHHCCEEECCCCCCCHHHC KADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVPVQVEPAHAGDATLQRDGTRWRD CCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH AVLADLKKQGSLPLPYDPSFVHEDDPGSGFAHDVSPPRFSHGYFLLRNRFGMLVETHSWK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC DYPTRVRVTRNAIVSVLQQAARNDAQWRTDAVVADQRATHLAGTSEPLSFAAGPQARTVA CCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEE FRGYAYTRTPSPISGALMTRYDESKPQIWKVPLRDQIKPDVVVDAPRGGYLVPAAQAALV EECEEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEECCHHHHHHH SEKLRLHGIAFQTIGNAAERPVQTVRADTVTFAARSNESHQTVELSGQRRDETRTVPAGS HHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCC LFVPIAQPKARLVMAMLEPQAPDSLLQWGFFTTAFERKEYMEAYVAEEVARDMLAKDDAL EEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KAQFEQRIASDSDFAKNPQARLEFFAKRHASWDERYQLYPLLRTAQTDFAPS HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCC >Mature Secondary Structure PRFTRLALRLLLLTSTSAALAATPLSTQAERSGFVQTGRYDEVIALCDAFAQRSPQAVR CHHHHHHHHHHHHHCCCHHHEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEE CIQFGTTPEGRPMKALVASTSGALDAQSAAQQKLPVVLIQGGLHAGEINGKDAGFLALRE EEEECCCCCCCCHHHEEECCCCCCCHHHHHHHCCCEEEEECCCEECCCCCCCHHHHHHHH LLDGKAGKGVLDKLVWVFVPVFTVDGHERCGAWNRPTQRGTEQMGWRTTAQNFNLNRDDV HHCCCCCCHHHHHHHHHHHHHEEECCHHHCCCCCCCHHHCHHHHCCEEECCCCCCCHHHC KADAPEMQAMLQLVQQWDPLMYVDLHVTDGAKFEHDVPVQVEPAHAGDATLQRDGTRWRD CCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHH AVLADLKKQGSLPLPYDPSFVHEDDPGSGFAHDVSPPRFSHGYFLLRNRFGMLVETHSWK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCC DYPTRVRVTRNAIVSVLQQAARNDAQWRTDAVVADQRATHLAGTSEPLSFAAGPQARTVA CCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEE FRGYAYTRTPSPISGALMTRYDESKPQIWKVPLRDQIKPDVVVDAPRGGYLVPAAQAALV EECEEEECCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCCEECCHHHHHHH SEKLRLHGIAFQTIGNAAERPVQTVRADTVTFAARSNESHQTVELSGQRRDETRTVPAGS HHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCC LFVPIAQPKARLVMAMLEPQAPDSLLQWGFFTTAFERKEYMEAYVAEEVARDMLAKDDAL EEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KAQFEQRIASDSDFAKNPQARLEFFAKRHASWDERYQLYPLLRTAQTDFAPS HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA