| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is bglB [H]
Identifier: 84623891
GI number: 84623891
Start: 2471762
End: 2474008
Strand: Direct
Name: bglB [H]
Synonym: XOO_2234
Alternate gene names: 84623891
Gene position: 2471762-2474008 (Clockwise)
Preceding gene: 84623890
Following gene: 84623893
Centisome position: 50.03
GC content: 65.11
Gene sequence:
>2247_bases ATGAAAACCTTTACACGCCGCCAACATCGCCCTCGTCCGTTGATTCTGGCGGTGGGCTTGGGTCTCGGCATCGCTTTGAC TGCACCACTGGCAGCCGCGCAAAACGCGCCGTCCTCCCAGCCGTGGAGGGACACCGCATTGACTGCGGACCAGCGCGCCG ACCGCTTGCTGGCGCAAATGACCGAAGACGAAAAATTCCAGATGCTGCGCAGCTATTTGGGCCTGGGCACCGACAAGATT CCCAAGCCTGCAGGCGCGCTGGGTTCGGCTGGCTACGTGCCCGGTATCGCAAGGCTGGGCATCCCCGCGCAGCAGCTGGC CGATGCCGGCGTGGGCGTGACCAACCCCGGCGGCATCCGCAAGGGCGACTACGCCACCGCAATGCCATCGGTTCTGTCGA CCGCATCGAGCTGGAACCGGCAATTGGCGTATGCCGGTGGCAAGACCATGGGCCGCGAATCCTGGCAGCAGGGCTTCAAC GTATTGCTCGCCGGCAGCGTCAATCTGCAGCGCGACCCGCGTAACGGACGCAATTTCGAATACGCGGGTGAAGATCCGTT GTTGGCCGGCACCATGGTCGGTGAATCGATTCGCGGCGTGCAAAGCGAACATGTGCTGTCGACAATGAAGCACTTCGCGC TCAACGACATGGAGACACGGCGCAACTTCCATAGCGCCCAGATCGGCGAGCAGGCGATGCACGAATCGGACCTGCTGGCC TTCGAGATCGCGCTGAAGATCGGCGACCCGGCCTCGGTGATGTGTTCGTACAACAAGATCAATGGCGTCTACGGCTGCGA GCACGATTACCTGCTCAACCAGGTGCTCAAACAGGAATGGAAATACCCCGGCTATGTAATGTCCGATTGGGGCGGCGTAC ACAGCGGCTCCAAGGCGGCGCTGGCGGGTCTGGATCAAGAATCGGCAGGCGAAGTGTTCGACGTGGCGGTGTTCTTCGAT GCACCGTTGCGCATGGCGGTGTCTGCCGGCGTGGTGCCACGCGCGCGCTTCGACGATATGGTCAAACGCATCCTGCGCAG CCTGTTCGCGCATGGCGCGTTCGATTACCCGACCCAGCGCCAACCCATCGATGGCAAGGCCGGTCTGTTGGCTGCGCAGC ATGTGGCCGAAGCAGGCAGCGTCTTGCTGCGCAACGAGCAGGCCATGTTGCCGGTGTCCCAGGACGTGCGCCGCATTGCC GTGATCGGCGGCTACGCCGACAAGGGCGTGATGTCCGGTGGCGGCTCCTCGCGCGTGGACGTCACCATCAACGGCGGCAA CGCGGTGCCCGGCATCACCCCGACCACCTGGCCCGGCCCGGTGATCATCCACCCGTCCTCGCCGCTGCAGGCGCTGCGCG CGGCATTGCCGAACGCGCAGATCGATTACGTCGACGGCAAAGATCGCGCCGCTGCCGCACGCGCCGCCAAGGCGGCCGAC GTGGCGATCGTGTTCGCCACCCAATGGGCCACCGAATCGGTGGACCTGCCGGATATGCGCTTGCCCGACAACCAGGACGC GCTGATCGAAGCGGTGGCCAAAGCCAACCCCAAAACCACCGTGGTACTGGAAACCAACGGGCCGGTGCGCATGCCGTGGG CCGAGCGCGTGCCGGCGGTGTTGCAAGCGTGGTATCCGGGCATCGGTGGCGGCGAGGCGATCGCCAATCTGCTGACCGGC ACGGTGAATCCTTCCGGCCACTTGCCGGTGACCTGGCCGGTGGACGAATCGCAGCTGCCGCGCCCCTCGATTCCGGGCCT GGGCTTCAAACCGGCCAAGCCGGGCGAAGACACCATCGACTACGCCATCGAAGGCGCCAACGTCGGTTACAAGTGGTTCG CCGCGCACAAGCTGACCCCGCGTTATCCGTTCGGCCATGGCCTGTCGTACACGCAGTTCCGCATGGATGGACTGCGCGTG GAGGCGAACGGCAGCCAGCTCACCGCCAGCTTCGAAGTGGAAAATATCGGCCAGCGCGAAGGCGCCGCCGTGCCACAGCT CTACGTCACCCTGCCCGACGGCCACGCCACCCCGCTGCGGCTGATCGGCTGGCAGAAGCTCACGCTCAAGCCGGGCGAAA AGCGTAGCGTGCAGGTAGTAGCCGAGCCAAAGACGTTGGCCGACTTCGACGCCCAGGCACGTCGCTGGACGATTGCGGCG GGCACTTATCGCGTGCAACTGGCGCGCTCGGCGAGCGAACCCGTGCAGAGCGCAGCGGTCACGCTGCAAGCCGCGCAGTT GCCGTGA
Upstream 100 bases:
>100_bases CCGCGCAGACCGACTTCGCGCCCAGTTGATCAGCCATTTCGGTGCCCCTCTGATTCGTTATGACCCAGCACTACAAGGAC ACGCCGTGCCGCAGCTTGAT
Downstream 100 bases:
>100_bases GCGTAGTGGGCGCATGCACTGAAGCGTGCGTGCGCCAGCTCGGGCTGGTTCGGTTGCCATGCGGCGCACGTCGCCAGGAA AAAATGTGGCGGATGCGTTG
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MKTFTRRQHRPRPLILAVGLGLGIALTAPLAAAQNAPSSQPWRDTALTADQRADRLLAQMTEDEKFQMLRSYLGLGTDKI PKPAGALGSAGYVPGIARLGIPAQQLADAGVGVTNPGGIRKGDYATAMPSVLSTASSWNRQLAYAGGKTMGRESWQQGFN VLLAGSVNLQRDPRNGRNFEYAGEDPLLAGTMVGESIRGVQSEHVLSTMKHFALNDMETRRNFHSAQIGEQAMHESDLLA FEIALKIGDPASVMCSYNKINGVYGCEHDYLLNQVLKQEWKYPGYVMSDWGGVHSGSKAALAGLDQESAGEVFDVAVFFD APLRMAVSAGVVPRARFDDMVKRILRSLFAHGAFDYPTQRQPIDGKAGLLAAQHVAEAGSVLLRNEQAMLPVSQDVRRIA VIGGYADKGVMSGGGSSRVDVTINGGNAVPGITPTTWPGPVIIHPSSPLQALRAALPNAQIDYVDGKDRAAAARAAKAAD VAIVFATQWATESVDLPDMRLPDNQDALIEAVAKANPKTTVVLETNGPVRMPWAERVPAVLQAWYPGIGGGEAIANLLTG TVNPSGHLPVTWPVDESQLPRPSIPGLGFKPAKPGEDTIDYAIEGANVGYKWFAAHKLTPRYPFGHGLSYTQFRMDGLRV EANGSQLTASFEVENIGQREGAAVPQLYVTLPDGHATPLRLIGWQKLTLKPGEKRSVQVVAEPKTLADFDAQARRWTIAA GTYRVQLARSASEPVQSAAVTLQAAQLP
Sequences:
>Translated_748_residues MKTFTRRQHRPRPLILAVGLGLGIALTAPLAAAQNAPSSQPWRDTALTADQRADRLLAQMTEDEKFQMLRSYLGLGTDKI PKPAGALGSAGYVPGIARLGIPAQQLADAGVGVTNPGGIRKGDYATAMPSVLSTASSWNRQLAYAGGKTMGRESWQQGFN VLLAGSVNLQRDPRNGRNFEYAGEDPLLAGTMVGESIRGVQSEHVLSTMKHFALNDMETRRNFHSAQIGEQAMHESDLLA FEIALKIGDPASVMCSYNKINGVYGCEHDYLLNQVLKQEWKYPGYVMSDWGGVHSGSKAALAGLDQESAGEVFDVAVFFD APLRMAVSAGVVPRARFDDMVKRILRSLFAHGAFDYPTQRQPIDGKAGLLAAQHVAEAGSVLLRNEQAMLPVSQDVRRIA VIGGYADKGVMSGGGSSRVDVTINGGNAVPGITPTTWPGPVIIHPSSPLQALRAALPNAQIDYVDGKDRAAAARAAKAAD VAIVFATQWATESVDLPDMRLPDNQDALIEAVAKANPKTTVVLETNGPVRMPWAERVPAVLQAWYPGIGGGEAIANLLTG TVNPSGHLPVTWPVDESQLPRPSIPGLGFKPAKPGEDTIDYAIEGANVGYKWFAAHKLTPRYPFGHGLSYTQFRMDGLRV EANGSQLTASFEVENIGQREGAAVPQLYVTLPDGHATPLRLIGWQKLTLKPGEKRSVQVVAEPKTLADFDAQARRWTIAA GTYRVQLARSASEPVQSAAVTLQAAQLP >Mature_748_residues MKTFTRRQHRPRPLILAVGLGLGIALTAPLAAAQNAPSSQPWRDTALTADQRADRLLAQMTEDEKFQMLRSYLGLGTDKI PKPAGALGSAGYVPGIARLGIPAQQLADAGVGVTNPGGIRKGDYATAMPSVLSTASSWNRQLAYAGGKTMGRESWQQGFN VLLAGSVNLQRDPRNGRNFEYAGEDPLLAGTMVGESIRGVQSEHVLSTMKHFALNDMETRRNFHSAQIGEQAMHESDLLA FEIALKIGDPASVMCSYNKINGVYGCEHDYLLNQVLKQEWKYPGYVMSDWGGVHSGSKAALAGLDQESAGEVFDVAVFFD APLRMAVSAGVVPRARFDDMVKRILRSLFAHGAFDYPTQRQPIDGKAGLLAAQHVAEAGSVLLRNEQAMLPVSQDVRRIA VIGGYADKGVMSGGGSSRVDVTINGGNAVPGITPTTWPGPVIIHPSSPLQALRAALPNAQIDYVDGKDRAAAARAAKAAD VAIVFATQWATESVDLPDMRLPDNQDALIEAVAKANPKTTVVLETNGPVRMPWAERVPAVLQAWYPGIGGGEAIANLLTG TVNPSGHLPVTWPVDESQLPRPSIPGLGFKPAKPGEDTIDYAIEGANVGYKWFAAHKLTPRYPFGHGLSYTQFRMDGLRV EANGSQLTASFEVENIGQREGAAVPQLYVTLPDGHATPLRLIGWQKLTLKPGEKRSVQVVAEPKTLADFDAQARRWTIAA GTYRVQLARSASEPVQSAAVTLQAAQLP
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=793, Percent_Identity=28.1210592686003, Blast_Score=196, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 80131; Mature: 80131
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFTRRQHRPRPLILAVGLGLGIALTAPLAAAQNAPSSQPWRDTALTADQRADRLLAQM CCCCCCHHCCCCCEEEEECCCCCHHHHCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHH TEDEKFQMLRSYLGLGTDKIPKPAGALGSAGYVPGIARLGIPAQQLADAGVGVTNPGGIR CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCCCCCC KGDYATAMPSVLSTASSWNRQLAYAGGKTMGRESWQQGFNVLLAGSVNLQRDPRNGRNFE CCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCCCEEEEEECEEEEECCCCCCCCC YAGEDPLLAGTMVGESIRGVQSEHVLSTMKHFALNDMETRRNFHSAQIGEQAMHESDLLA CCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE FEIALKIGDPASVMCSYNKINGVYGCEHDYLLNQVLKQEWKYPGYVMSDWGGVHSGSKAA EEEEEEECCCHHEEEECHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHH LAGLDQESAGEVFDVAVFFDAPLRMAVSAGVVPRARFDDMVKRILRSLFAHGAFDYPTQR EECCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC QPIDGKAGLLAAQHVAEAGSVLLRNEQAMLPVSQDVRRIAVIGGYADKGVMSGGGSSRVD CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCEEE VTINGGNAVPGITPTTWPGPVIIHPSSPLQALRAALPNAQIDYVDGKDRAAAARAAKAAD EEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC VAIVFATQWATESVDLPDMRLPDNQDALIEAVAKANPKTTVVLETNGPVRMPWAERVPAV EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEECCHHHHHHHH LQAWYPGIGGGEAIANLLTGTVNPSGHLPVTWPVDESQLPRPSIPGLGFKPAKPGEDTID HHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE YAIEGANVGYKWFAAHKLTPRYPFGHGLSYTQFRMDGLRVEANGSQLTASFEVENIGQRE EEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCEEEEEEEHHCCCCCC GAAVPQLYVTLPDGHATPLRLIGWQKLTLKPGEKRSVQVVAEPKTLADFDAQARRWTIAA CCCCCEEEEECCCCCCCCEEEECEEEEEECCCCCCCEEEEECCCHHHCCCCCCCEEEEEE GTYRVQLARSASEPVQSAAVTLQAAQLP CEEEEEEECCCCCHHHHHHEEEEECCCC >Mature Secondary Structure MKTFTRRQHRPRPLILAVGLGLGIALTAPLAAAQNAPSSQPWRDTALTADQRADRLLAQM CCCCCCHHCCCCCEEEEECCCCCHHHHCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHH TEDEKFQMLRSYLGLGTDKIPKPAGALGSAGYVPGIARLGIPAQQLADAGVGVTNPGGIR CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCCCCCC KGDYATAMPSVLSTASSWNRQLAYAGGKTMGRESWQQGFNVLLAGSVNLQRDPRNGRNFE CCCHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCCCEEEEEECEEEEECCCCCCCCC YAGEDPLLAGTMVGESIRGVQSEHVLSTMKHFALNDMETRRNFHSAQIGEQAMHESDLLA CCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEE FEIALKIGDPASVMCSYNKINGVYGCEHDYLLNQVLKQEWKYPGYVMSDWGGVHSGSKAA EEEEEEECCCHHEEEECHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHH LAGLDQESAGEVFDVAVFFDAPLRMAVSAGVVPRARFDDMVKRILRSLFAHGAFDYPTQR EECCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC QPIDGKAGLLAAQHVAEAGSVLLRNEQAMLPVSQDVRRIAVIGGYADKGVMSGGGSSRVD CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCHHHCCEEEEEECCCCCCCCCCCCCCCEEE VTINGGNAVPGITPTTWPGPVIIHPSSPLQALRAALPNAQIDYVDGKDRAAAARAAKAAD EEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC VAIVFATQWATESVDLPDMRLPDNQDALIEAVAKANPKTTVVLETNGPVRMPWAERVPAV EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEECCHHHHHHHH LQAWYPGIGGGEAIANLLTGTVNPSGHLPVTWPVDESQLPRPSIPGLGFKPAKPGEDTID HHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE YAIEGANVGYKWFAAHKLTPRYPFGHGLSYTQFRMDGLRVEANGSQLTASFEVENIGQRE EEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCEEEEEEEHHCCCCCC GAAVPQLYVTLPDGHATPLRLIGWQKLTLKPGEKRSVQVVAEPKTLADFDAQARRWTIAA CCCCCEEEEECCCCCCCCEEEECEEEEEECCCCCCCEEEEECCCHHHCCCCCCCEEEEEE GTYRVQLARSASEPVQSAAVTLQAAQLP CEEEEEEECCCCCHHHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2505054 [H]