| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623766
Identifier: 84623766
GI number: 84623766
Start: 2335281
End: 2336489
Strand: Direct
Name: 84623766
Synonym: XOO_2109
Alternate gene names: NA
Gene position: 2335281-2336489 (Clockwise)
Preceding gene: 84623765
Following gene: 84623768
Centisome position: 47.27
GC content: 63.11
Gene sequence:
>1209_bases GTGTCGGCCTATACGCACAGGGCACCGCGCTACTCCTACTTTTTCGGCTCATCCAACGGCGGCCGCGACGCGCTGATGGC CGTGCAGCGCTATCCGAATGCCTTCGACGGCGTGATCGCCGATGCGCCATCCGCGGACTGGACCCATAACGCATTTTCCT GGTTGTGGTCCGAGGATGCCGAGTTCGGCAATCCGGCGGCGACCATCGCTGCGGCCAAGCTGCCGGCGATCCAGGCCGCG GCACTTGCGCAATGCGATGCCAAGGATTCGACCGTAGACGGGGTGGTCAACGATCCGCGGCTGTGCCGTTTCGATCCTAG TGTGCTGCTGTGCAGTGCCGCCGAGACCGACAGCTGCCTGACCGCCGAACAGATCATGGCACTGGACTCGATTCTGAGCG GTCCGGTCAACCCTCGGACCGGGCAGCGCATCTACCCTGGCTTCGAACCGTTCGCCGTGGCCACGCCGACTTTCTGGGAC CGCTGGGTGACCGGCAACGCCACGGTACCCGGCGGTGGGAATGCGCTGCTGGCCAATCATTTCTTCGCCAACATGGTGTT CAACACCGATAGCGCTTCCTTCGACCATACCAAGGTCAACTTCGACGGCGATGTCGCACTCACCAACCGTACCTCCATCG CCGGTCAGTGGCTGTCCCATGTGATCAATGCCACTTCGCCGGATCTGAGCCGGTTCCGTGCGCGCAACGGCAAGCTTCTG CTGTATATCGGCTGGGAAGACCCCGTGGTGCCGCCGCGTGGGATGATCGCTTATTACGAATCGGTCGTTGCGAAGCTGCA CTCGGACAGCGCATCTGCAGCCAGCGATGACGACGCATTGCGGCATAAACAGCAGTTTTTCCGCCTGTTCATGGTACCGG GGATGGGCCATTTTACCGGCGGACCGGGCGCAACAGCGTTTGGCGCGCTGTATGGCGCACCCGGATTGGCGATCGATCGC CAGCACGATGTGTTGTCGGCGATGGAAGCGTGGGTCGAGCAGGGCGTCGCGCCCGATCGTATCGTCGCCGCCAAATACGT CAACGACGATCCCGCCCAGGGTGTGCTGCGTACGCGCCCGCTATGCAGCTATCCGCAATCGGCGCAGTGGACTGGGCATG GCGACTCCAACCAGGAGCAGAACTTCGTTTGTCGCGATTCGCCCCGTGGTGCGTACCCCGGCAGCGCGGATGCTGGATTG CCGCGCTGA
Upstream 100 bases:
>100_bases GATCGGCAGGCGATGCGAGTTTCGCGCTCAACCATCCGCAGAAAATCATCGACTGGGGTACCGGGCGCTGGCCAAGACGG CTCTCTACGGCAAGCAGATC
Downstream 100 bases:
>100_bases ATAGCTCGGCCGGTTCGTCGCTCGGCACCACTCGCCATGGTCAGGCATGTGCGTACCTGGCGCATCGATCAGGAGCAGGC ACAATGCGCGCGCCGGGCAG
Product: putative tannase precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSAYTHRAPRYSYFFGSSNGGRDALMAVQRYPNAFDGVIADAPSADWTHNAFSWLWSEDAEFGNPAATIAAAKLPAIQAA ALAQCDAKDSTVDGVVNDPRLCRFDPSVLLCSAAETDSCLTAEQIMALDSILSGPVNPRTGQRIYPGFEPFAVATPTFWD RWVTGNATVPGGGNALLANHFFANMVFNTDSASFDHTKVNFDGDVALTNRTSIAGQWLSHVINATSPDLSRFRARNGKLL LYIGWEDPVVPPRGMIAYYESVVAKLHSDSASAASDDDALRHKQQFFRLFMVPGMGHFTGGPGATAFGALYGAPGLAIDR QHDVLSAMEAWVEQGVAPDRIVAAKYVNDDPAQGVLRTRPLCSYPQSAQWTGHGDSNQEQNFVCRDSPRGAYPGSADAGL PR
Sequences:
>Translated_402_residues MSAYTHRAPRYSYFFGSSNGGRDALMAVQRYPNAFDGVIADAPSADWTHNAFSWLWSEDAEFGNPAATIAAAKLPAIQAA ALAQCDAKDSTVDGVVNDPRLCRFDPSVLLCSAAETDSCLTAEQIMALDSILSGPVNPRTGQRIYPGFEPFAVATPTFWD RWVTGNATVPGGGNALLANHFFANMVFNTDSASFDHTKVNFDGDVALTNRTSIAGQWLSHVINATSPDLSRFRARNGKLL LYIGWEDPVVPPRGMIAYYESVVAKLHSDSASAASDDDALRHKQQFFRLFMVPGMGHFTGGPGATAFGALYGAPGLAIDR QHDVLSAMEAWVEQGVAPDRIVAAKYVNDDPAQGVLRTRPLCSYPQSAQWTGHGDSNQEQNFVCRDSPRGAYPGSADAGL PR >Mature_401_residues SAYTHRAPRYSYFFGSSNGGRDALMAVQRYPNAFDGVIADAPSADWTHNAFSWLWSEDAEFGNPAATIAAAKLPAIQAAA LAQCDAKDSTVDGVVNDPRLCRFDPSVLLCSAAETDSCLTAEQIMALDSILSGPVNPRTGQRIYPGFEPFAVATPTFWDR WVTGNATVPGGGNALLANHFFANMVFNTDSASFDHTKVNFDGDVALTNRTSIAGQWLSHVINATSPDLSRFRARNGKLLL YIGWEDPVVPPRGMIAYYESVVAKLHSDSASAASDDDALRHKQQFFRLFMVPGMGHFTGGPGATAFGALYGAPGLAIDRQ HDVLSAMEAWVEQGVAPDRIVAAKYVNDDPAQGVLRTRPLCSYPQSAQWTGHGDSNQEQNFVCRDSPRGAYPGSADAGLP R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tannase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011118 [H]
Pfam domain/function: PF07519 Tannase [H]
EC number: NA
Molecular weight: Translated: 43288; Mature: 43157
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYTHRAPRYSYFFGSSNGGRDALMAVQRYPNAFDGVIADAPSADWTHNAFSWLWSEDA CCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHCCCC EFGNPAATIAAAKLPAIQAAALAQCDAKDSTVDGVVNDPRLCRFDPSVLLCSAAETDSCL CCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCHH TAEQIMALDSILSGPVNPRTGQRIYPGFEPFAVATPTFWDRWVTGNATVPGGGNALLANH HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHEECCCEECCCCCCEEHHHH FFANMVFNTDSASFDHTKVNFDGDVALTNRTSIAGQWLSHVINATSPDLSRFRARNGKLL HEEEEEECCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEE LYIGWEDPVVPPRGMIAYYESVVAKLHSDSASAASDDDALRHKQQFFRLFMVPGMGHFTG EEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GPGATAFGALYGAPGLAIDRQHDVLSAMEAWVEQGVAPDRIVAAKYVNDDPAQGVLRTRP CCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCC LCSYPQSAQWTGHGDSNQEQNFVCRDSPRGAYPGSADAGLPR CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SAYTHRAPRYSYFFGSSNGGRDALMAVQRYPNAFDGVIADAPSADWTHNAFSWLWSEDA CCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHCCCC EFGNPAATIAAAKLPAIQAAALAQCDAKDSTVDGVVNDPRLCRFDPSVLLCSAAETDSCL CCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCHH TAEQIMALDSILSGPVNPRTGQRIYPGFEPFAVATPTFWDRWVTGNATVPGGGNALLANH HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCHHHHEECCCEECCCCCCEEHHHH FFANMVFNTDSASFDHTKVNFDGDVALTNRTSIAGQWLSHVINATSPDLSRFRARNGKLL HEEEEEECCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEE LYIGWEDPVVPPRGMIAYYESVVAKLHSDSASAASDDDALRHKQQFFRLFMVPGMGHFTG EEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC GPGATAFGALYGAPGLAIDRQHDVLSAMEAWVEQGVAPDRIVAAKYVNDDPAQGVLRTRP CCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCC LCSYPQSAQWTGHGDSNQEQNFVCRDSPRGAYPGSADAGLPR CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]