| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is thrB [H]
Identifier: 84623765
GI number: 84623765
Start: 2333309
End: 2334277
Strand: Direct
Name: thrB [H]
Synonym: XOO_2108
Alternate gene names: 84623765
Gene position: 2333309-2334277 (Clockwise)
Preceding gene: 84623764
Following gene: 84623766
Centisome position: 47.23
GC content: 68.63
Gene sequence:
>969_bases ATGAGCGGTACAGGTCTGTCGTCGCCGCGCGCAGGTGCGGGGCATTCCGCGCCGCGCGAGGCACGCGCGTTCGCTCCGGC CTCGGTGGCCAACGTGGCGGTCGGGTTCGATCTGCTCGGTTATGCATTGGACGGCGTCGGCGATACGGTGACCGTGCGCC GTATTGATGCGCCGCAAGTACGCATTGCCGCGATCCGTGGTACCGCCGTCGAGCTTCCGCTGGAGGCCGAACGCAACACC GCGGGCGCGGCATTGGTCGCGCTGCGTAGCGCGTTGGCATTGCCGTTTGGCTTCGAGCTGGAGATCGACAAGGGGATCGC GCTCAGTTCCGGCATGGGCGGGTCGGCGGCGTCGTGCGTGGCGGCGCTGGTAGCAGCCAATGCGCTGTTGGAGGCCCCGT TGTCCCGCGACCAGCTCTATCTGAACGCGCTCGACGGCGAGGCGGTAGCCAGTGGCAGTCGCCATGGCGATAACCTGGGT CCGATGTTGTTGGGCGGCTTGGTGCTGTCCACGTTGGAGCGGATGGTGCCGGTGCCGGTGCCCGCGGCTTGGCATAGCTT GGTCGTGCATCCGGATGCGGTGCTGGAAACGCGCCGCGCGCGTGCAGCGCTGGCCGGCAACTATCGGCTCGATGAATTCG TGGCACAGAGCGCCAATCTTGCCTTGGTGTTGGCGGGCTGCCATGCCGGGGACGAATCGCTGGTTCGCGCAGGCTTGCGC GATGTGCTGATCGAGCCGCGGCGTGCGGGGTTGATTCTTGGCTTCGGCGCGGCCAAGGCCGCGGCGTTGGCCGCGGGGGC GATGGGTGCGGGCATTTCCGGAGCTGGCCCCAGCGTGTTTGCCTGGTTCGCCACCCGCGCGGCAGCCGAGGCGGCTGCGG CGGCGGTGCGGGCGACATTCACCGACGTTGGGTTCGGCAGCCAGAGTTGGGTGTCTGCGCTGAACTGCCCTGGCGCCAGG CTGCTGTAG
Upstream 100 bases:
>100_bases ACCCGCTGGTGGTGCAGGGTCCGGGTGCGGGGCCGGAAGTGACCGCAGCAGGCGTGTTCGCCGATCTGCTGCGCGTGGCG GCAGGCGAGGGTGCGCGGCT
Downstream 100 bases:
>100_bases CGCGCACCGGCCCTGGTGGTCGGGTGCGCCGCGTTCTTGCGTGTCTTGCGCAAGAACGTCGGAGCGGGAAATGCGATCGT GCACGCGTTCTGCATGCGGG
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSGTGLSSPRAGAGHSAPREARAFAPASVANVAVGFDLLGYALDGVGDTVTVRRIDAPQVRIAAIRGTAVELPLEAERNT AGAALVALRSALALPFGFELEIDKGIALSSGMGGSAASCVAALVAANALLEAPLSRDQLYLNALDGEAVASGSRHGDNLG PMLLGGLVLSTLERMVPVPVPAAWHSLVVHPDAVLETRRARAALAGNYRLDEFVAQSANLALVLAGCHAGDESLVRAGLR DVLIEPRRAGLILGFGAAKAAALAAGAMGAGISGAGPSVFAWFATRAAAEAAAAAVRATFTDVGFGSQSWVSALNCPGAR LL
Sequences:
>Translated_322_residues MSGTGLSSPRAGAGHSAPREARAFAPASVANVAVGFDLLGYALDGVGDTVTVRRIDAPQVRIAAIRGTAVELPLEAERNT AGAALVALRSALALPFGFELEIDKGIALSSGMGGSAASCVAALVAANALLEAPLSRDQLYLNALDGEAVASGSRHGDNLG PMLLGGLVLSTLERMVPVPVPAAWHSLVVHPDAVLETRRARAALAGNYRLDEFVAQSANLALVLAGCHAGDESLVRAGLR DVLIEPRRAGLILGFGAAKAAALAAGAMGAGISGAGPSVFAWFATRAAAEAAAAAVRATFTDVGFGSQSWVSALNCPGAR LL >Mature_321_residues SGTGLSSPRAGAGHSAPREARAFAPASVANVAVGFDLLGYALDGVGDTVTVRRIDAPQVRIAAIRGTAVELPLEAERNTA GAALVALRSALALPFGFELEIDKGIALSSGMGGSAASCVAALVAANALLEAPLSRDQLYLNALDGEAVASGSRHGDNLGP MLLGGLVLSTLERMVPVPVPAAWHSLVVHPDAVLETRRARAALAGNYRLDEFVAQSANLALVLAGCHAGDESLVRAGLRD VLIEPRRAGLILGFGAAKAAALAAGAMGAGISGAGPSVFAWFATRAAAEAAAAAVRATFTDVGFGSQSWVSALNCPGARL L
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=311, Percent_Identity=32.475884244373, Blast_Score=127, Evalue=9e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 32401; Mature: 32270
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTGLSSPRAGAGHSAPREARAFAPASVANVAVGFDLLGYALDGVGDTVTVRRIDAPQV CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE RIAAIRGTAVELPLEAERNTAGAALVALRSALALPFGFELEIDKGIALSSGMGGSAASCV EEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCHHHHHH AALVAANALLEAPLSRDQLYLNALDGEAVASGSRHGDNLGPMLLGGLVLSTLERMVPVPV HHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC PAAWHSLVVHPDAVLETRRARAALAGNYRLDEFVAQSANLALVLAGCHAGDESLVRAGLR CHHHHHEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH DVLIEPRRAGLILGFGAAKAAALAAGAMGAGISGAGPSVFAWFATRAAAEAAAAAVRATF HHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TDVGFGSQSWVSALNCPGARLL HHCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure SGTGLSSPRAGAGHSAPREARAFAPASVANVAVGFDLLGYALDGVGDTVTVRRIDAPQV CCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCE RIAAIRGTAVELPLEAERNTAGAALVALRSALALPFGFELEIDKGIALSSGMGGSAASCV EEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCHHHHHH AALVAANALLEAPLSRDQLYLNALDGEAVASGSRHGDNLGPMLLGGLVLSTLERMVPVPV HHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC PAAWHSLVVHPDAVLETRRARAALAGNYRLDEFVAQSANLALVLAGCHAGDESLVRAGLR CHHHHHEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHH DVLIEPRRAGLILGFGAAKAAALAAGAMGAGISGAGPSVFAWFATRAAAEAAAAAVRATF HHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TDVGFGSQSWVSALNCPGARLL HHCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA