Click here to switch to the map view.

The map label for this gene is 84623590

Identifier: 84623590

GI number: 84623590

Start: 2136745

End: 2137713

Strand: Direct

Name: 84623590

Synonym: XOO_1933

Alternate gene names: NA

Gene position: 2136745-2137713 (Clockwise)

Preceding gene: 84623588

Following gene: 84623591

Centisome position: 43.25

GC content: 64.4

Gene sequence:

>969_bases
GTGTCTGCTGTACAACCATCCATGAAGAAGAGAGACGGACGCTTGGTATCGCGGGCGGCGCTGGAAGAAATGCGCCTGAT
GGCGTTGCAACGGATGGGCGAAGGCGAATCGCTGGCCGAAGTGGCCTCGTCGTTCGGGTTGCATCGCGGCTGGGCGTACA
AAGTGCTGGCGCGAGCACAGGAGGGCGGCGCTGGCGCATTGATGACGCGTAAGGGCAGCGGTCGCCCGCGGACGTTGACG
CCGGCGCAGGAGCGCCAGGTGTTGGGCTGGGTCAATGGCAAGAACCCTCGCCAGCATGGCTTCGACTTCGGTTTGTGGAC
GCGGCAGGTCGTGCGTGAACTGATCGAGAAGAAGTTTGCCGCACGGTTGAGTCTGGCCAGCGTCGGGACGTTGCTGGCAC
GACTGGGGCTGAGCCCACAGAAGCCGCTGCAACACGCCTATCAGCGCGATCCACTGGCGGTAGCACAGTGGGAAAAGCAG
ACGTACCCGGCGATCGTGACGCACGCCAAGCGGGAAAAGGCCGAGATTGACTTCTGGGACGCGTCTGGCTTCCGTGCCGA
TGCGGTGCAAGGACGGACGTGGGCCGTCAAGGGCGTCACGCCGGTTGTCGCGGTGCCGGGGCAGCGCCAGAGCATCAGTG
CGGCCTCGGCGGTGAACAGCAAGGGCGGGTTCTGGTTCGCCGTGTACAGCGGCGGCATGAACGGTGAATTGTTCGTGGCT
CTGCTCAAGCGAATGATGAAGGGCCGTCGCCGTCCAATCCATCTGGTGCTCGATGGTTTGCCTGCCCACAAGACCCGTGG
CGTGCGCGATGACGTGGACAGCCTGAAGGGCAGGCTGACGCTGCATTTCCTGCCGGGTGACGCGCCGGACTTGAATCCCG
ACGAGATTGGTGTAGAGCTACACCAAGCGCACAGGCGTGGCGCGCCGCCCGCTGCGCAGTGGCGAGAAGCTGGCCGATCG
GGTGCATGA

Upstream 100 bases:

>100_bases
CAGACCCACCGCCTGCGTGTGCCGCAGCTTGACTAGGGCCTGTTAACATTAATGTCTCGAGCGATTACTAATAAGTCAGT
AAATTAGGAAACAAATACCA

Downstream 100 bases:

>100_bases
TCAGTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCAGGCATCCAAGTGTCGCCTATATTTCTGACT
TATGAGTAAACTATTGGGCA

Product: ISXoo2 transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; Helix-Turn-Helix Type; ISXoo2 Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase IS; Integrase Catalytic Region; Transposase Of IS; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase Fragmentary Gene

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESLAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLT
PAQERQVLGWVNGKNPRQHGFDFGLWTRQVVRELIEKKFAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQ
TYPAIVTHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELFVA
LLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDEIGVELHQAHRRGAPPAAQWREAGRS
GA

Sequences:

>Translated_322_residues
MSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESLAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLT
PAQERQVLGWVNGKNPRQHGFDFGLWTRQVVRELIEKKFAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQ
TYPAIVTHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELFVA
LLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDEIGVELHQAHRRGAPPAAQWREAGRS
GA
>Mature_321_residues
SAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESLAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTP
AQERQVLGWVNGKNPRQHGFDFGLWTRQVVRELIEKKFAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQT
YPAIVTHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELFVAL
LKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDEIGVELHQAHRRGAPPAAQWREAGRSG
A

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35328; Mature: 35197

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESLAEVASSFGLHRGWAYKVLARAQ
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHC
EGGAGALMTRKGSGRPRTLTPAQERQVLGWVNGKNPRQHGFDFGLWTRQVVRELIEKKFA
CCCCCEEEEECCCCCCCCCCCHHHHHEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
ARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVTHAKREKAEIDFWD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCEEEEC
ASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELFVA
CCCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
LLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDEIGVEL
HHHHHHHCCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHH
HQAHRRGAPPAAQWREAGRSGA
HHHHHCCCCCHHHHHHCCCCCC
>Mature Secondary Structure 
SAVQPSMKKRDGRLVSRAALEEMRLMALQRMGEGESLAEVASSFGLHRGWAYKVLARAQ
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHC
EGGAGALMTRKGSGRPRTLTPAQERQVLGWVNGKNPRQHGFDFGLWTRQVVRELIEKKFA
CCCCCEEEEECCCCCCCCCCCHHHHHEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
ARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVTHAKREKAEIDFWD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCEEEEC
ASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGMNGELFVA
CCCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHH
LLKRMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAPDLNPDEIGVEL
HHHHHHHCCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHH
HQAHRRGAPPAAQWREAGRSGA
HHHHHCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA