| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623588
Identifier: 84623588
GI number: 84623588
Start: 2134987
End: 2136009
Strand: Direct
Name: 84623588
Synonym: XOO_1931
Alternate gene names: NA
Gene position: 2134987-2136009 (Clockwise)
Preceding gene: 84623585
Following gene: 84623590
Centisome position: 43.22
GC content: 68.62
Gene sequence:
>1023_bases ATGCGTCCGATCTTCGCTCGCCTTGCCATCGCGATCTTGCCCGCCGCGCTGCCCGCCGCTGCGCGGGATGCCGACTTCGC TGCGCAGGCGGCGGCGCTGTATCGCACCCCGCCCGCGATCGCCGGTTGCCGTGCCGGCGAGCTGCAACCTGCGCAGCGAC AACGCGTGCTGGCGCTGATCAACGACATTCGTCGGCTGCACGGTCTCGACGCGGTCGACGACGACCCGGCGGCCGAGCCC GAAGCCACCCAGGCGGCCTTGGTCATTGCCGCCAACGGCCGCCTCATCCATACGCCAACGCCGGACTGGCGCTGCTACTC CGACACCGCGGCCAAGGGCGCACGCCGCAGCCTGATCTATGGCGGGGTCAGCTCGCCGCTGCTGCGTTTCTCCAGCGCCG AACAGATCGTGATCGAGTGGCTGACCGACGCCAACAATGTCAGCGCCGGTGGACTGGGACACCGCCGCTGGCTGCTGGAT CCGTTTCTGCAGCGCGTCGCCTTCGGCATGGTGGCTGGCCGCGACGGCGGCGCGTTCAGTCGCGGTGCTGCGCTGCGCTT CGTTCCGGCGGTTGGCGTCGCCGCGCGCACGCGCGCCGATTTCGTCGCCTGGCCGATCGGTGACTACCCGCGCCGTTACT ACGCTGACGATACGCTGTTGTCGTTCACCGCATTGCCGGACCGCACCCGCAAGTTCGCCAATCGCGATGTCGACTACGCC GATGCGCAGGTGCAGATCAGCGAGCGCGGTGGTCGCCAGTTGCAGGTGCGCAACCTGAGCGACGACCATGAGGGCTTCGG GGTGCCCAACAGCCTGCAGTTCCGGGTGCCGCGCCTGCAGCCGGAGATGATATACATTGTTCCAGCGCGCTGGGAGTCGG CGTTTCCAGGGTCAGCACGGTGGGGGCGACGCAGCAGCGGGCGCAGATCCTCCAGGTCCCGGCCGCGCGCCATCGCGACC AGCAGATCCTTGGTGTGCAGAATGCCCAGCACTTGCTCGCCATCTGCATCGAACCAGGGGTAG
Upstream 100 bases:
>100_bases CCAGGGTGGCCTGAGTGGTGGGCTATCTGTGCGGCGGCGGGCCCCGACAGAGTGCGACCTGCACTTTAAGGTAGAGCTCC CTGCGCTGTTCCGGCCTGCC
Downstream 100 bases:
>100_bases TGGCTGTAGCGCGACGCACTGAATTCGGCCAGGACCGCTTCCAGATTCATGCCTTCGCGCAGGCTGCGCATATGCTCGCG CGGACGCATCAGATCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRPIFARLAIAILPAALPAAARDADFAAQAAALYRTPPAIAGCRAGELQPAQRQRVLALINDIRRLHGLDAVDDDPAAEP EATQAALVIAANGRLIHTPTPDWRCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTDANNVSAGGLGHRRWLLD PFLQRVAFGMVAGRDGGAFSRGAALRFVPAVGVAARTRADFVAWPIGDYPRRYYADDTLLSFTALPDRTRKFANRDVDYA DAQVQISERGGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPEMIYIVPARWESAFPGSARWGRRSSGRRSSRSRPRAIAT SRSLVCRMPSTCSPSASNQG
Sequences:
>Translated_340_residues MRPIFARLAIAILPAALPAAARDADFAAQAAALYRTPPAIAGCRAGELQPAQRQRVLALINDIRRLHGLDAVDDDPAAEP EATQAALVIAANGRLIHTPTPDWRCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTDANNVSAGGLGHRRWLLD PFLQRVAFGMVAGRDGGAFSRGAALRFVPAVGVAARTRADFVAWPIGDYPRRYYADDTLLSFTALPDRTRKFANRDVDYA DAQVQISERGGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPEMIYIVPARWESAFPGSARWGRRSSGRRSSRSRPRAIAT SRSLVCRMPSTCSPSASNQG >Mature_340_residues MRPIFARLAIAILPAALPAAARDADFAAQAAALYRTPPAIAGCRAGELQPAQRQRVLALINDIRRLHGLDAVDDDPAAEP EATQAALVIAANGRLIHTPTPDWRCYSDTAAKGARRSLIYGGVSSPLLRFSSAEQIVIEWLTDANNVSAGGLGHRRWLLD PFLQRVAFGMVAGRDGGAFSRGAALRFVPAVGVAARTRADFVAWPIGDYPRRYYADDTLLSFTALPDRTRKFANRDVDYA DAQVQISERGGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPEMIYIVPARWESAFPGSARWGRRSSGRRSSRSRPRAIAT SRSLVCRMPSTCSPSASNQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37061; Mature: 37061
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPIFARLAIAILPAALPAAARDADFAAQAAALYRTPPAIAGCRAGELQPAQRQRVLALI CCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH NDIRRLHGLDAVDDDPAAEPEATQAALVIAANGRLIHTPTPDWRCYSDTAAKGARRSLIY HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCEECCHHHHCCHHHEEEE GGVSSPLLRFSSAEQIVIEWLTDANNVSAGGLGHRRWLLDPFLQRVAFGMVAGRDGGAFS CCCCCHHHHHCCCHHEEHEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC RGAALRFVPAVGVAARTRADFVAWPIGDYPRRYYADDTLLSFTALPDRTRKFANRDVDYA CCCEEEEECCCCHHHHCCCCEEEECCCCCCHHHCCCCCEEEEECCCHHHHHHHCCCCCCC DAQVQISERGGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPEMIYIVPARWESAFPGSAR CCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCC WGRRSSGRRSSRSRPRAIATSRSLVCRMPSTCSPSASNQG CCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MRPIFARLAIAILPAALPAAARDADFAAQAAALYRTPPAIAGCRAGELQPAQRQRVLALI CCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHH NDIRRLHGLDAVDDDPAAEPEATQAALVIAANGRLIHTPTPDWRCYSDTAAKGARRSLIY HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCEECCHHHHCCHHHEEEE GGVSSPLLRFSSAEQIVIEWLTDANNVSAGGLGHRRWLLDPFLQRVAFGMVAGRDGGAFS CCCCCHHHHHCCCHHEEHEEHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC RGAALRFVPAVGVAARTRADFVAWPIGDYPRRYYADDTLLSFTALPDRTRKFANRDVDYA CCCEEEEECCCCHHHHCCCCEEEECCCCCCHHHCCCCCEEEEECCCHHHHHHHCCCCCCC DAQVQISERGGRQLQVRNLSDDHEGFGVPNSLQFRVPRLQPEMIYIVPARWESAFPGSAR CCEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCC WGRRSSGRRSSRSRPRAIATSRSLVCRMPSTCSPSASNQG CCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA