| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623585
Identifier: 84623585
GI number: 84623585
Start: 2131951
End: 2132400
Strand: Direct
Name: 84623585
Synonym: XOO_1928
Alternate gene names: NA
Gene position: 2131951-2132400 (Clockwise)
Preceding gene: 84623573
Following gene: 84623588
Centisome position: 43.16
GC content: 64.22
Gene sequence:
>450_bases ATGGCACATGATGCGGTAGCGCCTGCACTGAAACACTGCGGCATTGCAGCCTGGGTGTGCTGCTGCCTCGCTTTGGAAAT TGCTTGCATGAATCGTCGGACGCTGATACTGCTGTTGTTGACTGCGACGCTGCGAATGCACAACGCCGCGCAGGCCGCCG ATGACAAGGGGGGGCTGAGTTTTGCGGTGGAAAGCGAGGGGTTTTCGCTCAATCCCACGCTGACCTCGGTCACGATCGAT TCGGTAAAGCCGGCCGCAGCCACAGCCACAGCCGGGCTGCAGGTGGGCGATGCGATCGTGTCCGCGCAAGGCATCGCGGT GGCGGGAAGCAAGGCCGATGTGCTCAAGCAGGCCTTCAACCGCAAGGTCGGGGAGACCCTGCGCTTGGTGATCGTGCGCG GCGCAGCCAAGCCGCGGGAGGTCACGCTGGTGGCGGCGCGACGGCCCTGA
Upstream 100 bases:
>100_bases TTAGATGGCCTATTGTCGACTGCCTGAGCCGGATGTGCACCTGTGCCGTGCGCAGTGCACGCGCCTCCACCGCCGCCGCA GCACGGGTCAGGGTCTGCCG
Downstream 100 bases:
>100_bases CCGACGGGCTAAGCGCTGCTAAAAGACGTCGCGGGCAGTGGGTCAGGTGGCTGCGGACGGCACGCAGGAACCGCAATGGA CGAGCGGTTCGTTGCCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAHDAVAPALKHCGIAAWVCCCLALEIACMNRRTLILLLLTATLRMHNAAQAADDKGGLSFAVESEGFSLNPTLTSVTID SVKPAAATATAGLQVGDAIVSAQGIAVAGSKADVLKQAFNRKVGETLRLVIVRGAAKPREVTLVAARRP
Sequences:
>Translated_149_residues MAHDAVAPALKHCGIAAWVCCCLALEIACMNRRTLILLLLTATLRMHNAAQAADDKGGLSFAVESEGFSLNPTLTSVTID SVKPAAATATAGLQVGDAIVSAQGIAVAGSKADVLKQAFNRKVGETLRLVIVRGAAKPREVTLVAARRP >Mature_148_residues AHDAVAPALKHCGIAAWVCCCLALEIACMNRRTLILLLLTATLRMHNAAQAADDKGGLSFAVESEGFSLNPTLTSVTIDS VKPAAATATAGLQVGDAIVSAQGIAVAGSKADVLKQAFNRKVGETLRLVIVRGAAKPREVTLVAARRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15416; Mature: 15285
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHDAVAPALKHCGIAAWVCCCLALEIACMNRRTLILLLLTATLRMHNAAQAADDKGGLS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE FAVESEGFSLNPTLTSVTIDSVKPAAATATAGLQVGDAIVSAQGIAVAGSKADVLKQAFN EEEECCCEEECCCEEEEEECCCCCCHHHHHCCCHHHHHHHHCCCEEEECCHHHHHHHHHH RKVGETLRLVIVRGAAKPREVTLVAARRP HHHHHHEEEEEEECCCCCCEEEEEEECCC >Mature Secondary Structure AHDAVAPALKHCGIAAWVCCCLALEIACMNRRTLILLLLTATLRMHNAAQAADDKGGLS CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE FAVESEGFSLNPTLTSVTIDSVKPAAATATAGLQVGDAIVSAQGIAVAGSKADVLKQAFN EEEECCCEEECCCEEEEEECCCCCCHHHHHCCCHHHHHHHHCCCEEEECCHHHHHHHHHH RKVGETLRLVIVRGAAKPREVTLVAARRP HHHHHHEEEEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA