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The map label for this gene is 84623502

Identifier: 84623502

GI number: 84623502

Start: 2030566

End: 2031012

Strand: Direct

Name: 84623502

Synonym: XOO_1845

Alternate gene names: NA

Gene position: 2030566-2031012 (Clockwise)

Preceding gene: 84623498

Following gene: 84623531

Centisome position: 41.1

GC content: 63.76

Gene sequence:

>447_bases
ATGACCTTGTACCTGTGGATCAAGACCTTCCACCTGCTGTTCGTCATTGCCTGGATGGCGGCGGTGTTCTACCTGCCACG
GATCCTGATCAACATCGCCGAGGCCGGCGACGATGCCGGCGTGCGTGCGCGGCTGGTGCTGATGGGACGGCGGCTGTATG
GCTTCGGCCACAGCATGCTGGGCCTGGCGCTGTTGTTGGGGGCGGTGTTGTGGCAAGGCTTCCGCTTCATCCCGGATTTT
CCGACCATGGTCGCGGGCGGTTGGTTGCACGCCAAGCTCGCGGCGGTCGCACTGATCCTTGCGCACTACAGCGTGTCCGG
CCGCTGGTTGAAGGGCGTGGAACATGGTTGTCCCGTGCCCAGTGGGCGGGCGCTGCGCTGGTTCAACGAATTGCCGGTCA
TCCTGCTGGTGGCGGTGATCTGGCTGGTGCTGGCCAAACCGTTTTGA

Upstream 100 bases:

>100_bases
GTACTGCTTGGCATCGGATGTGGGCATGCAGCTGCGTGCCATCGTGCACGCGAATCGGGGAAACTACCGATCATCCTACG
CGAGCCAGCGGAGCCAGCGC

Downstream 100 bases:

>100_bases
GCGAGCGGCCGGCGGTGCCGCTCAGCGGGTCGCCTCCACGTACAGCGCGTGCGGCTCGTGATGACGCTGCCGGCTGGTCA
CCCCGGCTCGTCTGGGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTLYLWIKTFHLLFVIAWMAAVFYLPRILINIAEAGDDAGVRARLVLMGRRLYGFGHSMLGLALLLGAVLWQGFRFIPDF
PTMVAGGWLHAKLAAVALILAHYSVSGRWLKGVEHGCPVPSGRALRWFNELPVILLVAVIWLVLAKPF

Sequences:

>Translated_148_residues
MTLYLWIKTFHLLFVIAWMAAVFYLPRILINIAEAGDDAGVRARLVLMGRRLYGFGHSMLGLALLLGAVLWQGFRFIPDF
PTMVAGGWLHAKLAAVALILAHYSVSGRWLKGVEHGCPVPSGRALRWFNELPVILLVAVIWLVLAKPF
>Mature_147_residues
TLYLWIKTFHLLFVIAWMAAVFYLPRILINIAEAGDDAGVRARLVLMGRRLYGFGHSMLGLALLLGAVLWQGFRFIPDFP
TMVAGGWLHAKLAAVALILAHYSVSGRWLKGVEHGCPVPSGRALRWFNELPVILLVAVIWLVLAKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16509; Mature: 16378

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYLWIKTFHLLFVIAWMAAVFYLPRILINIAEAGDDAGVRARLVLMGRRLYGFGHSML
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHH
GLALLLGAVLWQGFRFIPDFPTMVAGGWLHAKLAAVALILAHYSVSGRWLKGVEHGCPVP
HHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
SGRALRWFNELPVILLVAVIWLVLAKPF
CCCHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLYLWIKTFHLLFVIAWMAAVFYLPRILINIAEAGDDAGVRARLVLMGRRLYGFGHSML
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHH
GLALLLGAVLWQGFRFIPDFPTMVAGGWLHAKLAAVALILAHYSVSGRWLKGVEHGCPVP
HHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
SGRALRWFNELPVILLVAVIWLVLAKPF
CCCHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]