| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is mmuP [H]
Identifier: 84623484
GI number: 84623484
Start: 2010956
End: 2012353
Strand: Direct
Name: mmuP [H]
Synonym: XOO_1827
Alternate gene names: 84623484
Gene position: 2010956-2012353 (Clockwise)
Preceding gene: 84623483
Following gene: 84623485
Centisome position: 40.71
GC content: 63.95
Gene sequence:
>1398_bases ATGCCAGAACCATCGTCCACCACCGCCCCGCAGTTCCGGCGCAGCATGCAGGTGCGCCATCTGGTGATGCTGTCGCTGGG CGGCGTGATCGGTACCGGCTTGTTCTTCAATACCGGGTACATCATTGCCAGCACCGGCGCGCTGGGCACGGTGCTCGCAT ATCTGATCGGCGCGTTGGTGGTGTACCTGGTGATGCAATGCCTGGGCGAGTTGGCGGTGGCGATGCCGCAGACCGGCGCA TTCCACGTGTATGCCGCGCGTTATCTGGGGCCGGCGACCGGCTACGTGGTTGCGTGGTTGTACTGGCTGACCTGGACGGT GGCATTGGGCTCGAGCCTAACCGCAGCGGCGTTCTGCATGCAGTACTGGTTTCCGCATAGCCCGGCGTGGCCGTGGTGTC TGCTGTTCTGCGCGCTGATCTTCGGTTTGAACACGGTCTCGGCGCGCTGGTTTGCAGAAGGCGAGTTCTGGTTTTCGTTG ATCAAGGTCATCACCATCCTGGTGTTCATCGTGCTTGGCGGTGCGGCGGTGATCGGTCTGCTGCCACTGGCCGATGGTTC GCCTGCACCCGGGCTGCGTCATCTACGTGCCGATGGCTGGTTTGCGCATGGAACGCTGCCGATCCTGATGACGATGGTGG CAGTGAATTTTGCATTTTCCGGCACCGAGTTGATTGGTGTGGCCGCCGGCGAAACCGAGCAGCCAGCGCGCGCGATTCCG CTGGCGATCCGCACAACGCTGATGCGGCTGGTGGTGTTCTTCGTCGGCACGGTGCTGGTGCTGGCAGCGCTGCTGCCTGC CGAACAAGCGGCAGTGGAGACGAGCCCGTTCGTGCGCGCCTTCGAGCTGTTGGGCATTCCGTATGCGGCCGACCTCTTGA ATGCGGTGATCCTCACCGCGATCCTGTCGGCGGCCAATTCCGGCCTGTATGCGGCCGCGCGCATGCTGTGGTCGTTGGCC AACGAAGGCACGTTGCCTTCGGGCCTGACGCGGTTGACCGGCCGCGGCATTCCGTTGCGCGCCGTGTCGTTGAGCATGTT GGGTGGCTTGCTGGCGCTGCTCACGGGCGTGTATGCGGCCGACACCGTGTTCGTTGCGATCTCGGCGGTTTCGGGGTTTG CGGTGGTGGTGGTGTGGCTGAGCATCTGCGCGTCGCACTATGTGTTTCGTCGCCAGCTGCTGCGCGATGGCGTTGCGCCA GAGACGCTGGCGTACCGCGCGCCGTGGTATCCATGGACACCGATCCTCGGCTTTTCGCTGTGTCTGCTGGCCTGTATCGG GCTGGCATTCGATCCGCAGCAGCGCATCGCGTTGTGGTGCGGCGTTCCGTTCGTTGCGCTGTGCTACGGCGCTTACGCAC TTACCCAACGGCTTGCGGCCCGGAGACTGCACGCATGA
Upstream 100 bases:
>100_bases CGCCACGGAGCAGCAGGCCCTGCGTCACAGCTCGGGTGTAAACGGCTGTGCCCGTCTGCGTGCGCGTGGCAGGATGGAGC GCCCCTGATCGGACGCGCCC
Downstream 100 bases:
>100_bases CGATTGCTTTCCGCCAACCGCGCGCAGATGCGCCTTTCAGCCAGCTCTTGCAGCACGACGGCTGCGTGCTGCTGGATGGC GCCCTGGCCACCGAGCTGGA
Product: S-methylmethionine transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MPEPSSTTAPQFRRSMQVRHLVMLSLGGVIGTGLFFNTGYIIASTGALGTVLAYLIGALVVYLVMQCLGELAVAMPQTGA FHVYAARYLGPATGYVVAWLYWLTWTVALGSSLTAAAFCMQYWFPHSPAWPWCLLFCALIFGLNTVSARWFAEGEFWFSL IKVITILVFIVLGGAAVIGLLPLADGSPAPGLRHLRADGWFAHGTLPILMTMVAVNFAFSGTELIGVAAGETEQPARAIP LAIRTTLMRLVVFFVGTVLVLAALLPAEQAAVETSPFVRAFELLGIPYAADLLNAVILTAILSAANSGLYAAARMLWSLA NEGTLPSGLTRLTGRGIPLRAVSLSMLGGLLALLTGVYAADTVFVAISAVSGFAVVVVWLSICASHYVFRRQLLRDGVAP ETLAYRAPWYPWTPILGFSLCLLACIGLAFDPQQRIALWCGVPFVALCYGAYALTQRLAARRLHA
Sequences:
>Translated_465_residues MPEPSSTTAPQFRRSMQVRHLVMLSLGGVIGTGLFFNTGYIIASTGALGTVLAYLIGALVVYLVMQCLGELAVAMPQTGA FHVYAARYLGPATGYVVAWLYWLTWTVALGSSLTAAAFCMQYWFPHSPAWPWCLLFCALIFGLNTVSARWFAEGEFWFSL IKVITILVFIVLGGAAVIGLLPLADGSPAPGLRHLRADGWFAHGTLPILMTMVAVNFAFSGTELIGVAAGETEQPARAIP LAIRTTLMRLVVFFVGTVLVLAALLPAEQAAVETSPFVRAFELLGIPYAADLLNAVILTAILSAANSGLYAAARMLWSLA NEGTLPSGLTRLTGRGIPLRAVSLSMLGGLLALLTGVYAADTVFVAISAVSGFAVVVVWLSICASHYVFRRQLLRDGVAP ETLAYRAPWYPWTPILGFSLCLLACIGLAFDPQQRIALWCGVPFVALCYGAYALTQRLAARRLHA >Mature_464_residues PEPSSTTAPQFRRSMQVRHLVMLSLGGVIGTGLFFNTGYIIASTGALGTVLAYLIGALVVYLVMQCLGELAVAMPQTGAF HVYAARYLGPATGYVVAWLYWLTWTVALGSSLTAAAFCMQYWFPHSPAWPWCLLFCALIFGLNTVSARWFAEGEFWFSLI KVITILVFIVLGGAAVIGLLPLADGSPAPGLRHLRADGWFAHGTLPILMTMVAVNFAFSGTELIGVAAGETEQPARAIPL AIRTTLMRLVVFFVGTVLVLAALLPAEQAAVETSPFVRAFELLGIPYAADLLNAVILTAILSAANSGLYAAARMLWSLAN EGTLPSGLTRLTGRGIPLRAVSLSMLGGLLALLTGVYAADTVFVAISAVSGFAVVVVWLSICASHYVFRRQLLRDGVAPE TLAYRAPWYPWTPILGFSLCLLACIGLAFDPQQRIALWCGVPFVALCYGAYALTQRLAARRLHA
Specific function: Transporter for the intake of S-methylmethionine [H]
COG id: COG0833
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Homo sapiens, GI115648063, Length=369, Percent_Identity=22.7642276422764, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI115648022, Length=369, Percent_Identity=22.7642276422764, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI87081708, Length=460, Percent_Identity=72.8260869565217, Blast_Score=696, Evalue=0.0, Organism=Escherichia coli, GI1788480, Length=470, Percent_Identity=37.6595744680851, Blast_Score=323, Evalue=2e-89, Organism=Escherichia coli, GI1786302, Length=414, Percent_Identity=35.2657004830918, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1786789, Length=422, Percent_Identity=34.8341232227488, Blast_Score=249, Evalue=2e-67, Organism=Escherichia coli, GI48994972, Length=467, Percent_Identity=32.5481798715203, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1786602, Length=453, Percent_Identity=35.0993377483444, Blast_Score=245, Evalue=5e-66, Organism=Escherichia coli, GI87081915, Length=457, Percent_Identity=32.1663019693654, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI1790653, Length=397, Percent_Identity=33.7531486146096, Blast_Score=231, Evalue=9e-62, Organism=Escherichia coli, GI1789017, Length=454, Percent_Identity=32.5991189427313, Blast_Score=225, Evalue=5e-60, Organism=Escherichia coli, GI87081869, Length=330, Percent_Identity=24.2424242424242, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532491, Length=406, Percent_Identity=21.4285714285714, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17540018, Length=344, Percent_Identity=21.8023255813953, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320772, Length=418, Percent_Identity=32.0574162679426, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6324553, Length=410, Percent_Identity=33.4146341463415, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6324061, Length=427, Percent_Identity=29.9765807962529, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6324059, Length=428, Percent_Identity=31.5420560747664, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6324990, Length=477, Percent_Identity=29.1404612159329, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6321629, Length=428, Percent_Identity=30.3738317757009, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320717, Length=427, Percent_Identity=30.2107728337237, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6321053, Length=419, Percent_Identity=29.8329355608592, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6319543, Length=427, Percent_Identity=29.03981264637, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6319824, Length=420, Percent_Identity=28.8095238095238, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6319542, Length=434, Percent_Identity=28.110599078341, Blast_Score=180, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6320251, Length=440, Percent_Identity=26.8181818181818, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6322892, Length=436, Percent_Identity=29.3577981651376, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6322967, Length=428, Percent_Identity=28.7383177570093, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6324924, Length=437, Percent_Identity=28.604118993135, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6324981, Length=427, Percent_Identity=30.9133489461358, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6319608, Length=433, Percent_Identity=22.6327944572748, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6320364, Length=547, Percent_Identity=21.7550274223035, Blast_Score=97, Evalue=7e-21, Organism=Drosophila melanogaster, GI221331183, Length=356, Percent_Identity=21.0674157303371, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI17647653, Length=356, Percent_Identity=21.0674157303371, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI24664379, Length=356, Percent_Identity=21.0674157303371, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 49798; Mature: 49666
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPSSTTAPQFRRSMQVRHLVMLSLGGVIGTGLFFNTGYIIASTGALGTVLAYLIGALV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH VYLVMQCLGELAVAMPQTGAFHVYAARYLGPATGYVVAWLYWLTWTVALGSSLTAAAFCM HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QYWFPHSPAWPWCLLFCALIFGLNTVSARWFAEGEFWFSLIKVITILVFIVLGGAAVIGL HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLADGSPAPGLRHLRADGWFAHGTLPILMTMVAVNFAFSGTELIGVAAGETEQPARAIP HCCCCCCCCCCHHHHCCCCCEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH LAIRTTLMRLVVFFVGTVLVLAALLPAEQAAVETSPFVRAFELLGIPYAADLLNAVILTA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH ILSAANSGLYAAARMLWSLANEGTLPSGLTRLTGRGIPLRAVSLSMLGGLLALLTGVYAA HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH DTVFVAISAVSGFAVVVVWLSICASHYVFRRQLLRDGVAPETLAYRAPWYPWTPILGFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHH CLLACIGLAFDPQQRIALWCGVPFVALCYGAYALTQRLAARRLHA HHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PEPSSTTAPQFRRSMQVRHLVMLSLGGVIGTGLFFNTGYIIASTGALGTVLAYLIGALV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH VYLVMQCLGELAVAMPQTGAFHVYAARYLGPATGYVVAWLYWLTWTVALGSSLTAAAFCM HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH QYWFPHSPAWPWCLLFCALIFGLNTVSARWFAEGEFWFSLIKVITILVFIVLGGAAVIGL HHHCCCCCCCHHHHHHHHHHHCCCHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLADGSPAPGLRHLRADGWFAHGTLPILMTMVAVNFAFSGTELIGVAAGETEQPARAIP HCCCCCCCCCCHHHHCCCCCEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH LAIRTTLMRLVVFFVGTVLVLAALLPAEQAAVETSPFVRAFELLGIPYAADLLNAVILTA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHH ILSAANSGLYAAARMLWSLANEGTLPSGLTRLTGRGIPLRAVSLSMLGGLLALLTGVYAA HHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH DTVFVAISAVSGFAVVVVWLSICASHYVFRRQLLRDGVAPETLAYRAPWYPWTPILGFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHH CLLACIGLAFDPQQRIALWCGVPFVALCYGAYALTQRLAARRLHA HHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 9882684 [H]