| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623439
Identifier: 84623439
GI number: 84623439
Start: 1968882
End: 1969055
Strand: Direct
Name: 84623439
Synonym: XOO_1782
Alternate gene names: NA
Gene position: 1968882-1969055 (Clockwise)
Preceding gene: 84623436
Following gene: 84623441
Centisome position: 39.85
GC content: 55.17
Gene sequence:
>174_bases ATGATCAAGTGGGCCATCATTTTCGCAATTATCGGCTTGATTGCCGGTGCGCTGGGCTTCGGCGGCATGGCAGGCGCTGC GATGGGTATCGCCAAGTTCCTGTTCTGGGCGGGCATTATCATTGCCATCGTGCTCTTCGTGCTGGGTATGACGATTGCCA AGAAGGTGATCTGA
Upstream 100 bases:
>100_bases GCGGCACATTCGAATCGGTAGCGTGCGGTGCATGTTGTGCGGCACTGCGCCGCAAGCACACGATCGAACAACGGCACGGT GCCGATGAGGAGCTAACATC
Downstream 100 bases:
>100_bases CGCAGGGCGCGCCGCCGGGCACGCGCTTCGCTGCCTGGCTGCATTACCCAGTATCAAAAAGAGCGGCCAATGGCCGCTCT TTTTTGTTCTGCAAATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI
Sequences:
>Translated_57_residues MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI >Mature_57_residues MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0391 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009760 [H]
Pfam domain/function: PF07043 DUF1328 [H]
EC number: NA
Molecular weight: Translated: 5895; Mature: 5895
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]