Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84623436

Identifier: 84623436

GI number: 84623436

Start: 1963495

End: 1966323

Strand: Direct

Name: 84623436

Synonym: XOO_1779

Alternate gene names: NA

Gene position: 1963495-1966323 (Clockwise)

Preceding gene: 84623425

Following gene: 84623439

Centisome position: 39.75

GC content: 64.79

Gene sequence:

>2829_bases
ATGAAGAAGAAAGACGTCGCCAGGACTGTACTGGCCTCGGCGCTGGCTGTTGCGTTGACCGCGTGCGGCGGCGGCGGTGG
GGGCATTGCCCGTCAAAGCACGCCGGCCGCACCGCCGCCGACCTCGCCACCCCCGCCTCCGCCGACGTCGCCGCCGCCGC
CGGTGACACCCACGACGCCAGAGCCGGCGATCGATGCGCACCTCGTATTGACCAACGCGCGTGCAGCGCAAGCGCTCGGC
TTTACCGGTGCCGGGTATCGCATCGGTGTCATCGATACCGGCATCAATGCCAATCATCCGGCGTTGCAGGGGCGCGTGAG
CGACAGCTTCATCTATGTGGATCCGCGTACCAACAACACCGCGGTAGGCGATGTGGTCGGGCACGGCACCGTGGTGGCCG
AGCTGGCAGCCGGACGTGCGGTCGGTCAGTGGCCCGGCGGTATCGCGCCCGGTGCCGGTCTGCTATCTGCACGCATCATC
AGCGACCGCGCACCGGTGGATGACGGTAGCGGCAATGGCAACGAGATCGATGGCCCACTTGGTCTGGGGCCGGTGCATGC
CGATCTGATCAGTGCAGGCGTGCGCATCATGAACAACTCGTGGGGCGGCCTGTATTGGAACGACCCGACGGTGACCAATC
AGATCGCGCAGGAATATCGCCCTTTCATCCTCAGCAATAATGGGCTGGTGGTGTTCGCGTCGGGCAATGAGTCGCGCTCG
CAGCCGTCGGATACTGCGGCGCTGCCCAGTCAGCCTGGCCCCAATGGCACGCTGCCGGCGGCCGATCTGGAGCGTGGCTG
GTTGGTGGTTGGCGCGGTGGATACCGCCAATCCGACGCAGCTGGCGTCGTACTCCAATGCCTGTGGTGTGGCGATGCGCT
ATTGCCTGGTTGCGCCAGGGACCTCGCTGTTCATCGATCCCGACGCCACCGCCGGCAACATCCGCTATTTCTACGGAAGC
GGCACCTCGTTTGCAGCACCGCTGGTCTCCGGTGCGGCTGCGTTGGTGTGGCAGGCATTTCCTTATTTCAACAACGATCT
GGTGCGGCAGACCTTGCTGGGAACCGCCACCGATCTGGGGGCTGCGGGCGTGGACCCGGTGTTCGGCTATGGATTGCTCA
ATGTCGGCAAGGCAGTGCTCGGGCCGGCACGCTTCGATTGGGGCACGGTGGATGTCAACGTCACGACCTTGCGTTCGACC
TGGGCAAACGACATCAGTGGCACCGGTGGCCTGACCAAGCGCGGTACCGGCACGTTGGTATTGAGCAGCACGGCCAATAC
CTTCGCCGGCGATACCCAGGTACTCGCTGGCACCTTGCAGACCGCCAGTTTGCAGAGCGCGCGCGTGAGTATCGCCAACG
GTGCCAGCCTGGTCGGCGCGGGCAGGATCGGTGGGCAGGTTGATAACGCCGGCACGTTGCAGGTCAATGGCGCGACCGCG
TCCATTACCGGCAATTACACCCAGGCCAGCAACGGGCGCCTGGCAGTAAACGTGGGTGATCGTTTGAATGTTGCGGGCAC
GGCGACCATCGCAGGCGACCTGCAACTGCTCGGCCGGCGCGATTACGTCGTCAACAACACAACCTATCCGGTGCTGCAAG
CCACCAGTGGCTTGCAAGGCACGTTCGATACGCTGAGCAGCGGGCCGGCCGTGACCTTCCTGACCGCGACGCGCAGCTAC
GACGCCAATACCGCGTATATCTCGCTGCAGCGCATGGATGTCACTGCGGTCGCCGCATCGCTTGGCGCGATAGGTACCGC
GTCGATGGATTCGGCCATGCGCGTCGAGCAAGCGTTCCAGAAGGTGGATGCGCAGCAGTTCCAGGGCAATGGTGCACTCG
GCGGCGACTTCATTCGCGCTGCAGCGGCATTGCAGCAATCGCCAACCGCCAAGGCCGCTGCAGACTCGCTACGCAGTCTG
TCTGGTCGTGCGCACGCAGCATCCGCCGCGATGACGTTCGACACCATCGATTTGGGCCGCCGCGCATTGGCATCGCATTT
CGATGGCCTGTCGCAACAGCCGCGCTTGTTGGGCAGCTGGCAGCGCGCACTTGGCGGGCCGGGCGAGGGCGGGGCGACCA
CCTCGGGCTTTGCCACGTCCGGCTGGATGATGGGCAACGATCTACGTCTGGCGTCTGGCGCGGTCACTGGTTTTGCATTC
GGCGAAACGCGCTCCAGCAGCCTGGGCGATCTGGACGGTGCACGCGGGCGCGATCGTCAGGTGCAGGCGCAGTTGTACTG
GGGCACGATGCTGGGTGCTGCGTACACGCTGGGCCAGATGGGTTTTGGCAACGTCAATCGGCAGATCGAACGCAGCCTGC
AACTGGGCGAAGACCGCAGTAGTGCCTTCAGCGACTACAGCGGCAGTTATCTCAGCAGCAATCTGGAAACCGGGTACCGC
TGGGGCGGTGCGCAGGCAAGCCTGACCCCGTATATGGGTCTGGATTACGTGCGTTTGCGCAGCGATGGCTTCCGCGAAAG
CGGCGGCGATGGTTTCGGCTTGCGTGCCAACGCGAGTACGTCCTCGCGCACGCAGGCGCTTGCCGGTGTGCGCTCGGCGT
ATCGCTGGCGCGGTATCCAGTTGGGCGGTTACGCCGAATGGCAGCAAGCGCTGAGCAGCGACGGCCTGATGCTGGATGCC
AGCTTCGTCGGTGTGGATGCGTGGGCGCCGTTGCGTGGCATGCAGCCGGCACGCTCGGGTGGTCTATTCGGGATCACTGC
AGCAGCGCCGTTGGGTCAGCAGAGCCAGCTGCGTTTCGGTTACGACCAGCGAGTGGGCGAGCGCGGCGACGATCGCGCGT
TGAGCCTGCGTTATAGCGCCGATTTCTGA

Upstream 100 bases:

>100_bases
GCACACGCGCCCCGCGCGCGCGCTTTCCGATTACAGTAAGCAAAGCGTTATTCAGGGCCGATCGGGCCCCATCCATGGAA
CGGGTTCAGGGAGAACACCA

Downstream 100 bases:

>100_bases
TCGGCGCTTCATCCGTCTGACCCATGTATTCCCTGTCCAGGCAGCTGCCTGGACAGGGCTTCACTCGCCGCGCAGCTTGT
GCAGAAAGCGCGGTGCGGTG

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 942; Mature: 942

Protein sequence:

>942_residues
MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTPEPAIDAHLVLTNARAAQALG
FTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARII
SDRAPVDDGSGNGNEIDGPLGLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS
QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRYFYGS
GTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRST
WANDISGTGGLTKRGTGTLVLSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA
SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQGTFDTLSSGPAVTFLTATRSY
DANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQKVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSL
SGRAHAASAAMTFDTIDLGRRALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF
GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRSSAFSDYSGSYLSSNLETGYR
WGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDA
SFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF

Sequences:

>Translated_942_residues
MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTPEPAIDAHLVLTNARAAQALG
FTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARII
SDRAPVDDGSGNGNEIDGPLGLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS
QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRYFYGS
GTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRST
WANDISGTGGLTKRGTGTLVLSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA
SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQGTFDTLSSGPAVTFLTATRSY
DANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQKVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSL
SGRAHAASAAMTFDTIDLGRRALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF
GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRSSAFSDYSGSYLSSNLETGYR
WGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDA
SFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF
>Mature_942_residues
MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTPEPAIDAHLVLTNARAAQALG
FTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARII
SDRAPVDDGSGNGNEIDGPLGLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS
QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRYFYGS
GTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRST
WANDISGTGGLTKRGTGTLVLSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA
SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQGTFDTLSSGPAVTFLTATRSY
DANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQKVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSL
SGRAHAASAAMTFDTIDLGRRALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF
GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRSSAFSDYSGSYLSSNLETGYR
WGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDA
SFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase S8 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR013425
- InterPro:   IPR006315
- InterPro:   IPR011050
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500 [H]

Pfam domain/function: PF03797 Autotransporter; PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 97040; Mature: 97040

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTP
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPAIDAHLVLTNARAAQALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNT
CCCCCEEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEECCCCCCC
AVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARIISDRAPVDDGSGNGNEIDGPL
EECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCC
GLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS
CCCHHHHHHHHHCEEEEECCCCCEEECCCHHHHHHHHHCCCEEEECCCEEEEECCCCCCC
QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHCCCC
TSLFIDPDATAGNIRYFYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLG
CEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
AAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRSTWANDISGTGGLTKRGTGTLV
CCCCCHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEEE
LSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA
EECCCCCCCCCCHHEEHHHHHHHHCHHEEEECCCCEEEECCCCCCCCCCCCEEEECCEEE
SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQG
EEECCEEECCCCEEEEECCCCCCCCEEEEEECCHHEECCCCEEECCCCCCEEEECCCCCC
TFDTLSSGPAVTFLTATRSYDANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQ
CHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHH
KVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSLSGRAHAASAAMTFDTIDLGR
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHEEEEHHHHHHH
RALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEE
GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRS
CCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH
SAFSDYSGSYLSSNLETGYRWGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANAST
HHHCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC
SSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDASFVGVDAWAPLRGMQPARSG
CHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCC
GLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF
CEEEEECCCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTP
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPAIDAHLVLTNARAAQALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNT
CCCCCEEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEECCCCCCC
AVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARIISDRAPVDDGSGNGNEIDGPL
EECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCC
GLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS
CCCHHHHHHHHHCEEEEECCCCCEEECCCHHHHHHHHHCCCEEEECCCEEEEECCCCCCC
QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHCCCC
TSLFIDPDATAGNIRYFYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLG
CEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
AAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRSTWANDISGTGGLTKRGTGTLV
CCCCCHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEEE
LSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA
EECCCCCCCCCCHHEEHHHHHHHHCHHEEEECCCCEEEECCCCCCCCCCCCEEEECCEEE
SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQG
EEECCEEECCCCEEEEECCCCCCCCEEEEEECCHHEECCCCEEECCCCCCEEEECCCCCC
TFDTLSSGPAVTFLTATRSYDANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQ
CHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHH
KVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSLSGRAHAASAAMTFDTIDLGR
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHEEEEHHHHHHH
RALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEE
GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRS
CCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH
SAFSDYSGSYLSSNLETGYRWGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANAST
HHHCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC
SSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDASFVGVDAWAPLRGMQPARSG
CHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCC
GLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF
CEEEEECCCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3011754; 1639760 [H]