| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623436
Identifier: 84623436
GI number: 84623436
Start: 1963495
End: 1966323
Strand: Direct
Name: 84623436
Synonym: XOO_1779
Alternate gene names: NA
Gene position: 1963495-1966323 (Clockwise)
Preceding gene: 84623425
Following gene: 84623439
Centisome position: 39.75
GC content: 64.79
Gene sequence:
>2829_bases ATGAAGAAGAAAGACGTCGCCAGGACTGTACTGGCCTCGGCGCTGGCTGTTGCGTTGACCGCGTGCGGCGGCGGCGGTGG GGGCATTGCCCGTCAAAGCACGCCGGCCGCACCGCCGCCGACCTCGCCACCCCCGCCTCCGCCGACGTCGCCGCCGCCGC CGGTGACACCCACGACGCCAGAGCCGGCGATCGATGCGCACCTCGTATTGACCAACGCGCGTGCAGCGCAAGCGCTCGGC TTTACCGGTGCCGGGTATCGCATCGGTGTCATCGATACCGGCATCAATGCCAATCATCCGGCGTTGCAGGGGCGCGTGAG CGACAGCTTCATCTATGTGGATCCGCGTACCAACAACACCGCGGTAGGCGATGTGGTCGGGCACGGCACCGTGGTGGCCG AGCTGGCAGCCGGACGTGCGGTCGGTCAGTGGCCCGGCGGTATCGCGCCCGGTGCCGGTCTGCTATCTGCACGCATCATC AGCGACCGCGCACCGGTGGATGACGGTAGCGGCAATGGCAACGAGATCGATGGCCCACTTGGTCTGGGGCCGGTGCATGC CGATCTGATCAGTGCAGGCGTGCGCATCATGAACAACTCGTGGGGCGGCCTGTATTGGAACGACCCGACGGTGACCAATC AGATCGCGCAGGAATATCGCCCTTTCATCCTCAGCAATAATGGGCTGGTGGTGTTCGCGTCGGGCAATGAGTCGCGCTCG CAGCCGTCGGATACTGCGGCGCTGCCCAGTCAGCCTGGCCCCAATGGCACGCTGCCGGCGGCCGATCTGGAGCGTGGCTG GTTGGTGGTTGGCGCGGTGGATACCGCCAATCCGACGCAGCTGGCGTCGTACTCCAATGCCTGTGGTGTGGCGATGCGCT ATTGCCTGGTTGCGCCAGGGACCTCGCTGTTCATCGATCCCGACGCCACCGCCGGCAACATCCGCTATTTCTACGGAAGC GGCACCTCGTTTGCAGCACCGCTGGTCTCCGGTGCGGCTGCGTTGGTGTGGCAGGCATTTCCTTATTTCAACAACGATCT GGTGCGGCAGACCTTGCTGGGAACCGCCACCGATCTGGGGGCTGCGGGCGTGGACCCGGTGTTCGGCTATGGATTGCTCA ATGTCGGCAAGGCAGTGCTCGGGCCGGCACGCTTCGATTGGGGCACGGTGGATGTCAACGTCACGACCTTGCGTTCGACC TGGGCAAACGACATCAGTGGCACCGGTGGCCTGACCAAGCGCGGTACCGGCACGTTGGTATTGAGCAGCACGGCCAATAC CTTCGCCGGCGATACCCAGGTACTCGCTGGCACCTTGCAGACCGCCAGTTTGCAGAGCGCGCGCGTGAGTATCGCCAACG GTGCCAGCCTGGTCGGCGCGGGCAGGATCGGTGGGCAGGTTGATAACGCCGGCACGTTGCAGGTCAATGGCGCGACCGCG TCCATTACCGGCAATTACACCCAGGCCAGCAACGGGCGCCTGGCAGTAAACGTGGGTGATCGTTTGAATGTTGCGGGCAC GGCGACCATCGCAGGCGACCTGCAACTGCTCGGCCGGCGCGATTACGTCGTCAACAACACAACCTATCCGGTGCTGCAAG CCACCAGTGGCTTGCAAGGCACGTTCGATACGCTGAGCAGCGGGCCGGCCGTGACCTTCCTGACCGCGACGCGCAGCTAC GACGCCAATACCGCGTATATCTCGCTGCAGCGCATGGATGTCACTGCGGTCGCCGCATCGCTTGGCGCGATAGGTACCGC GTCGATGGATTCGGCCATGCGCGTCGAGCAAGCGTTCCAGAAGGTGGATGCGCAGCAGTTCCAGGGCAATGGTGCACTCG GCGGCGACTTCATTCGCGCTGCAGCGGCATTGCAGCAATCGCCAACCGCCAAGGCCGCTGCAGACTCGCTACGCAGTCTG TCTGGTCGTGCGCACGCAGCATCCGCCGCGATGACGTTCGACACCATCGATTTGGGCCGCCGCGCATTGGCATCGCATTT CGATGGCCTGTCGCAACAGCCGCGCTTGTTGGGCAGCTGGCAGCGCGCACTTGGCGGGCCGGGCGAGGGCGGGGCGACCA CCTCGGGCTTTGCCACGTCCGGCTGGATGATGGGCAACGATCTACGTCTGGCGTCTGGCGCGGTCACTGGTTTTGCATTC GGCGAAACGCGCTCCAGCAGCCTGGGCGATCTGGACGGTGCACGCGGGCGCGATCGTCAGGTGCAGGCGCAGTTGTACTG GGGCACGATGCTGGGTGCTGCGTACACGCTGGGCCAGATGGGTTTTGGCAACGTCAATCGGCAGATCGAACGCAGCCTGC AACTGGGCGAAGACCGCAGTAGTGCCTTCAGCGACTACAGCGGCAGTTATCTCAGCAGCAATCTGGAAACCGGGTACCGC TGGGGCGGTGCGCAGGCAAGCCTGACCCCGTATATGGGTCTGGATTACGTGCGTTTGCGCAGCGATGGCTTCCGCGAAAG CGGCGGCGATGGTTTCGGCTTGCGTGCCAACGCGAGTACGTCCTCGCGCACGCAGGCGCTTGCCGGTGTGCGCTCGGCGT ATCGCTGGCGCGGTATCCAGTTGGGCGGTTACGCCGAATGGCAGCAAGCGCTGAGCAGCGACGGCCTGATGCTGGATGCC AGCTTCGTCGGTGTGGATGCGTGGGCGCCGTTGCGTGGCATGCAGCCGGCACGCTCGGGTGGTCTATTCGGGATCACTGC AGCAGCGCCGTTGGGTCAGCAGAGCCAGCTGCGTTTCGGTTACGACCAGCGAGTGGGCGAGCGCGGCGACGATCGCGCGT TGAGCCTGCGTTATAGCGCCGATTTCTGA
Upstream 100 bases:
>100_bases GCACACGCGCCCCGCGCGCGCGCTTTCCGATTACAGTAAGCAAAGCGTTATTCAGGGCCGATCGGGCCCCATCCATGGAA CGGGTTCAGGGAGAACACCA
Downstream 100 bases:
>100_bases TCGGCGCTTCATCCGTCTGACCCATGTATTCCCTGTCCAGGCAGCTGCCTGGACAGGGCTTCACTCGCCGCGCAGCTTGT GCAGAAAGCGCGGTGCGGTG
Product: serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 942; Mature: 942
Protein sequence:
>942_residues MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTPEPAIDAHLVLTNARAAQALG FTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARII SDRAPVDDGSGNGNEIDGPLGLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRYFYGS GTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRST WANDISGTGGLTKRGTGTLVLSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQGTFDTLSSGPAVTFLTATRSY DANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQKVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSL SGRAHAASAAMTFDTIDLGRRALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRSSAFSDYSGSYLSSNLETGYR WGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDA SFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF
Sequences:
>Translated_942_residues MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTPEPAIDAHLVLTNARAAQALG FTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARII SDRAPVDDGSGNGNEIDGPLGLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRYFYGS GTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRST WANDISGTGGLTKRGTGTLVLSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQGTFDTLSSGPAVTFLTATRSY DANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQKVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSL SGRAHAASAAMTFDTIDLGRRALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRSSAFSDYSGSYLSSNLETGYR WGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDA SFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF >Mature_942_residues MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTPEPAIDAHLVLTNARAAQALG FTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNTAVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARII SDRAPVDDGSGNGNEIDGPLGLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPGTSLFIDPDATAGNIRYFYGS GTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLGAAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRST WANDISGTGGLTKRGTGTLVLSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQGTFDTLSSGPAVTFLTATRSY DANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQKVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSL SGRAHAASAAMTFDTIDLGRRALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRSSAFSDYSGSYLSSNLETGYR WGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANASTSSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDA SFVGVDAWAPLRGMQPARSGGLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase S8 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013425 - InterPro: IPR006315 - InterPro: IPR011050 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF03797 Autotransporter; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 97040; Mature: 97040
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTP CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPAIDAHLVLTNARAAQALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNT CCCCCEEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEECCCCCCC AVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARIISDRAPVDDGSGNGNEIDGPL EECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCC GLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS CCCHHHHHHHHHCEEEEECCCCCEEECCCHHHHHHHHHCCCEEEECCCEEEEECCCCCCC QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPG CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHCCCC TSLFIDPDATAGNIRYFYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLG CEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC AAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRSTWANDISGTGGLTKRGTGTLV CCCCCHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEEE LSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA EECCCCCCCCCCHHEEHHHHHHHHCHHEEEECCCCEEEECCCCCCCCCCCCEEEECCEEE SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQG EEECCEEECCCCEEEEECCCCCCCCEEEEEECCHHEECCCCEEECCCCCCEEEECCCCCC TFDTLSSGPAVTFLTATRSYDANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQ CHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHH KVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSLSGRAHAASAAMTFDTIDLGR HHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHEEEEHHHHHHH RALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEE GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRS CCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH SAFSDYSGSYLSSNLETGYRWGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANAST HHHCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC SSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDASFVGVDAWAPLRGMQPARSG CHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCC GLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF CEEEEECCCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCC >Mature Secondary Structure MKKKDVARTVLASALAVALTACGGGGGGIARQSTPAAPPPTSPPPPPPTSPPPPVTPTTP CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPAIDAHLVLTNARAAQALGFTGAGYRIGVIDTGINANHPALQGRVSDSFIYVDPRTNNT CCCCCEEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEECCCCCCC AVGDVVGHGTVVAELAAGRAVGQWPGGIAPGAGLLSARIISDRAPVDDGSGNGNEIDGPL EECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCCCCCCC GLGPVHADLISAGVRIMNNSWGGLYWNDPTVTNQIAQEYRPFILSNNGLVVFASGNESRS CCCHHHHHHHHHCEEEEECCCCCEEECCCHHHHHHHHHCCCEEEECCCEEEEECCCCCCC QPSDTAALPSQPGPNGTLPAADLERGWLVVGAVDTANPTQLASYSNACGVAMRYCLVAPG CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCHHHHHHHHHHCCCC TSLFIDPDATAGNIRYFYGSGTSFAAPLVSGAAALVWQAFPYFNNDLVRQTLLGTATDLG CEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC AAGVDPVFGYGLLNVGKAVLGPARFDWGTVDVNVTTLRSTWANDISGTGGLTKRGTGTLV CCCCCHHHHHHHHHHCHHHHCCCCCCCEEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEEE LSSTANTFAGDTQVLAGTLQTASLQSARVSIANGASLVGAGRIGGQVDNAGTLQVNGATA EECCCCCCCCCCHHEEHHHHHHHHCHHEEEECCCCEEEECCCCCCCCCCCCEEEECCEEE SITGNYTQASNGRLAVNVGDRLNVAGTATIAGDLQLLGRRDYVVNNTTYPVLQATSGLQG EEECCEEECCCCEEEEECCCCCCCCEEEEEECCHHEECCCCEEECCCCCCEEEECCCCCC TFDTLSSGPAVTFLTATRSYDANTAYISLQRMDVTAVAASLGAIGTASMDSAMRVEQAFQ CHHHHCCCCEEEEEEEECCCCCCEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHH KVDAQQFQGNGALGGDFIRAAAALQQSPTAKAAADSLRSLSGRAHAASAAMTFDTIDLGR HHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHEEEEHHHHHHH RALASHFDGLSQQPRLLGSWQRALGGPGEGGATTSGFATSGWMMGNDLRLASGAVTGFAF HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCEEEECCCEEEEEE GETRSSSLGDLDGARGRDRQVQAQLYWGTMLGAAYTLGQMGFGNVNRQIERSLQLGEDRS CCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHH SAFSDYSGSYLSSNLETGYRWGGAQASLTPYMGLDYVRLRSDGFRESGGDGFGLRANAST HHHCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC SSRTQALAGVRSAYRWRGIQLGGYAEWQQALSSDGLMLDASFVGVDAWAPLRGMQPARSG CHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCC GLFGITAAAPLGQQSQLRFGYDQRVGERGDDRALSLRYSADF CEEEEECCCCCCCCCCEECCHHHHCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3011754; 1639760 [H]