Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84623439

Identifier: 84623439

GI number: 84623439

Start: 1968882

End: 1969055

Strand: Direct

Name: 84623439

Synonym: XOO_1782

Alternate gene names: NA

Gene position: 1968882-1969055 (Clockwise)

Preceding gene: 84623436

Following gene: 84623441

Centisome position: 39.85

GC content: 55.17

Gene sequence:

>174_bases
ATGATCAAGTGGGCCATCATTTTCGCAATTATCGGCTTGATTGCCGGTGCGCTGGGCTTCGGCGGCATGGCAGGCGCTGC
GATGGGTATCGCCAAGTTCCTGTTCTGGGCGGGCATTATCATTGCCATCGTGCTCTTCGTGCTGGGTATGACGATTGCCA
AGAAGGTGATCTGA

Upstream 100 bases:

>100_bases
GCGGCACATTCGAATCGGTAGCGTGCGGTGCATGTTGTGCGGCACTGCGCCGCAAGCACACGATCGAACAACGGCACGGT
GCCGATGAGGAGCTAACATC

Downstream 100 bases:

>100_bases
CGCAGGGCGCGCCGCCGGGCACGCGCTTCGCTGCCTGGCTGCATTACCCAGTATCAAAAAGAGCGGCCAATGGCCGCTCT
TTTTTGTTCTGCAAATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI

Sequences:

>Translated_57_residues
MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI
>Mature_57_residues
MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009760 [H]

Pfam domain/function: PF07043 DUF1328 [H]

EC number: NA

Molecular weight: Translated: 5895; Mature: 5895

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKWAIIFAIIGLIAGALGFGGMAGAAMGIAKFLFWAGIIIAIVLFVLGMTIAKKVI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]