| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is mtnP [H]
Identifier: 84623421
GI number: 84623421
Start: 1949396
End: 1950148
Strand: Direct
Name: mtnP [H]
Synonym: XOO_1764
Alternate gene names: 84623421
Gene position: 1949396-1950148 (Clockwise)
Preceding gene: 84623420
Following gene: 84623422
Centisome position: 39.46
GC content: 64.28
Gene sequence:
>753_bases GTGTCCGCAAATTCCATCGCATTGGCCGTCATCGGCGGCACTGGTGTCTACACGCTCGCGCAGCTGGACGATGTGCAGTC GCACCACGTCCCAACGCCCTATGGCGCGCCGTCCGGGCCGATCCGCGTCGGCATGCTGCTTGGCCATCGCGTCGCCTTCC TGGCCCGGCATGGCGAAGGGCATTCGCTGCCGCCGCACAAGGTCAATTACCGCGCAAACATCGCTGCACTGCAGCAAATC GGTGCCTCGCGCGTGCTGGCGCTCAACACCGTGGGCGGCATCACCGAACAGTTCGGACCACGCGTGTTAGCCTGCCCGGA CCAGCTGATCGACTACACCTGGGGTCGTGTGTCCACCTTCTGCGAAGAGCCAGGCAGCGAGGTGCAGCACGTGGATTTCG GCCATCCGTATTCGCCGATGTTTCGCAGCAAGGTGATTGCGGCAGCCAACGTGACCGGCGTCACGATGGTGGCGGGCGGT TGCTACGGTGCGACACAAGGACCACGGCTGGAAACGATTGCAGAGATCGCACGCATGCGCCGCGATGGCTGCGATCTGGT CGGCATGACCGGCATGCCCGAAGCCGGCCTGTCGCGCGAAAAAGGCCTGGAATATGCGTGTCTGGCGATTGTGGCCAATT GGGCGGCCGGTTGCGGCGACGCCCAGGAAATCACCATGGCCGAGGTGTTGGCCAATGTCGATGCCGCATCGTCCGGCTTG CCCGAGCTGATTGGCGAACTTGCACGCGGGTGA
Upstream 100 bases:
>100_bases GCGATGAAGCAGTAACCCGCCGTTTTCCGCTCGCAGACGTGCGAGCTGCCGAGCGCGCCTTGCTGCGCGCACCGTCGTTG ATTTGTTGCAGAGGTCGGTT
Downstream 100 bases:
>100_bases TTGTCATCGGGGCATAAGCTTTGCATACTCGGCGCGTACGCACGCCGTACACCACCCATTCATTATTGCAAAGGTCTCGC ATCACCATGCCGAACGGTAC
Product: 5'-methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSANSIALAVIGGTGVYTLAQLDDVQSHHVPTPYGAPSGPIRVGMLLGHRVAFLARHGEGHSLPPHKVNYRANIAALQQI GASRVLALNTVGGITEQFGPRVLACPDQLIDYTWGRVSTFCEEPGSEVQHVDFGHPYSPMFRSKVIAAANVTGVTMVAGG CYGATQGPRLETIAEIARMRRDGCDLVGMTGMPEAGLSREKGLEYACLAIVANWAAGCGDAQEITMAEVLANVDAASSGL PELIGELARG
Sequences:
>Translated_250_residues MSANSIALAVIGGTGVYTLAQLDDVQSHHVPTPYGAPSGPIRVGMLLGHRVAFLARHGEGHSLPPHKVNYRANIAALQQI GASRVLALNTVGGITEQFGPRVLACPDQLIDYTWGRVSTFCEEPGSEVQHVDFGHPYSPMFRSKVIAAANVTGVTMVAGG CYGATQGPRLETIAEIARMRRDGCDLVGMTGMPEAGLSREKGLEYACLAIVANWAAGCGDAQEITMAEVLANVDAASSGL PELIGELARG >Mature_249_residues SANSIALAVIGGTGVYTLAQLDDVQSHHVPTPYGAPSGPIRVGMLLGHRVAFLARHGEGHSLPPHKVNYRANIAALQQIG ASRVLALNTVGGITEQFGPRVLACPDQLIDYTWGRVSTFCEEPGSEVQHVDFGHPYSPMFRSKVIAAANVTGVTMVAGGC YGATQGPRLETIAEIARMRRDGCDLVGMTGMPEAGLSREKGLEYACLAIVANWAAGCGDAQEITMAEVLANVDAASSGLP ELIGELARG
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=246, Percent_Identity=29.2682926829268, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71980569, Length=255, Percent_Identity=33.7254901960784, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323045, Length=246, Percent_Identity=32.520325203252, Blast_Score=124, Evalue=1e-29, Organism=Drosophila melanogaster, GI221459247, Length=242, Percent_Identity=32.2314049586777, Blast_Score=129, Evalue=1e-30, Organism=Drosophila melanogaster, GI20130079, Length=254, Percent_Identity=31.496062992126, Blast_Score=117, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 26179; Mature: 26048
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS01240 PNP_MTAP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANSIALAVIGGTGVYTLAQLDDVQSHHVPTPYGAPSGPIRVGMLLGHRVAFLARHGEG CCCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHEECCCC HSLPPHKVNYRANIAALQQIGASRVLALNTVGGITEQFGPRVLACPDQLIDYTWGRVSTF CCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHCCHHHHHCCEEEECCHHHHHHHHHHHHHH CEEPGSEVQHVDFGHPYSPMFRSKVIAAANVTGVTMVAGGCYGATQGPRLETIAEIARMR HHCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH RDGCDLVGMTGMPEAGLSREKGLEYACLAIVANWAAGCGDAQEITMAEVLANVDAASSGL HCCCCEEECCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCH PELIGELARG HHHHHHHHCC >Mature Secondary Structure SANSIALAVIGGTGVYTLAQLDDVQSHHVPTPYGAPSGPIRVGMLLGHRVAFLARHGEG CCCCEEEEEECCCCEEEHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHEECCCC HSLPPHKVNYRANIAALQQIGASRVLALNTVGGITEQFGPRVLACPDQLIDYTWGRVSTF CCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHCCHHHHHCCEEEECCHHHHHHHHHHHHHH CEEPGSEVQHVDFGHPYSPMFRSKVIAAANVTGVTMVAGGCYGATQGPRLETIAEIARMR HHCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH RDGCDLVGMTGMPEAGLSREKGLEYACLAIVANWAAGCGDAQEITMAEVLANVDAASSGL HCCCCEEECCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCH PELIGELARG HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]