| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623240
Identifier: 84623240
GI number: 84623240
Start: 1731651
End: 1732088
Strand: Direct
Name: 84623240
Synonym: XOO_1583
Alternate gene names: NA
Gene position: 1731651-1732088 (Clockwise)
Preceding gene: 84623226
Following gene: 84623266
Centisome position: 35.05
GC content: 57.08
Gene sequence:
>438_bases ATGACCGTAGGGAAACGCCTGAAGGAAGAGCGCAAGCGGCTTGGCCTGACTCAGGACGAGATGGCTGTGCAGCTTGGCCT CACGCGCTACGCGCAACTGAACTTCGAGAAAGACGTCAACCTGCCCGGCGGAGCGTACCTACTGGCCGCGCTAGAGCGTG GAGTTGATGTCATGTACGTGCTGTCTGGACATCGGGCGCAGTTGGACCCAGCCGATCGGCTACTGCTGTCTGCGTTCAAA GATGCATCGCCGGCTGCGCGCAATGCTGTGCTTGCTGCGTTGGGTTTGTCGGCCGATGCCTCGTCTTCCAAGACTGGGAC CGGCCCAGTTCTGTCGTTCAACAAGAGCGAGATTGGCTCGATAATTTCTACTACCGCACCGATCGATCAAAGCAACATGC AGATCGTTGTTGGTGGACGCAAAAAAAAGAGCAAGTGA
Upstream 100 bases:
>100_bases AACTGCTGCATTTGACTCTTACGGGGCATGTCGCGGTTCCGCCTACTTTTTGGGAATTATGTGGACTTAACTCAACATTG TCAAGTAAGGAAATGCCTGT
Downstream 100 bases:
>100_bases TCAGCATCGAGATTGGACAGCTGCTCGTGGCAAATTTGCCGTTCTCGGCTATACCAACGTGAACTGTAGACACACGGTTC ATAGGCAACAAAAAAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Protei
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MTVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAALERGVDVMYVLSGHRAQLDPADRLLLSAFK DASPAARNAVLAALGLSADASSSKTGTGPVLSFNKSEIGSIISTTAPIDQSNMQIVVGGRKKKSK
Sequences:
>Translated_145_residues MTVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAALERGVDVMYVLSGHRAQLDPADRLLLSAFK DASPAARNAVLAALGLSADASSSKTGTGPVLSFNKSEIGSIISTTAPIDQSNMQIVVGGRKKKSK >Mature_144_residues TVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAALERGVDVMYVLSGHRAQLDPADRLLLSAFKD ASPAARNAVLAALGLSADASSSKTGTGPVLSFNKSEIGSIISTTAPIDQSNMQIVVGGRKKKSK
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15444; Mature: 15313
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAALERGVDVMYV CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEE LSGHRAQLDPADRLLLSAFKDASPAARNAVLAALGLSADASSSKTGTGPVLSFNKSEIGS ECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHH IISTTAPIDQSNMQIVVGGRKKKSK HHHCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure TVGKRLKEERKRLGLTQDEMAVQLGLTRYAQLNFEKDVNLPGGAYLLAALERGVDVMYV CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEE LSGHRAQLDPADRLLLSAFKDASPAARNAVLAALGLSADASSSKTGTGPVLSFNKSEIGS ECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHH IISTTAPIDQSNMQIVVGGRKKKSK HHHCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA