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The map label for this gene is tsr [H]

Identifier: 84623217

GI number: 84623217

Start: 1714305

End: 1714733

Strand: Direct

Name: tsr [H]

Synonym: XOO_1560

Alternate gene names: 84623217

Gene position: 1714305-1714733 (Clockwise)

Preceding gene: 84623216

Following gene: 84623218

Centisome position: 34.7

GC content: 63.17

Gene sequence:

>429_bases
ATGGTCGAGAGCCTCAACCATCTGATGTCCACGGCCGACGGCAACCTGCAGTCGCTGTCGGCATTGCTGCAATCGATCGC
AGCGGGCGACCTCACCGCACGCATGAGTGGCGAGTTCCGCGGCGTGTTCGCACAGATGCGCGACGATGCCAATGCAACGG
CAAGCCAGTTGGCGCGGATCGTTGGCAATATCCAGCAGTCAGCAGTGTCGATCAACGCGGCTGCCAGCGAGATTGCCGCC
GGCAACCAGGACCTGTCGCAGCGCACCGACCAGCAAGCAGCCAACCTGGAAGAAACTGCCGCCTCGATGGAAGAACTGAC
CTCCACCGTCAGGCAGAATGCCGAGCGCGCGCGGCAGGCCAACCAACTGGCGATCGGTGCCGCACGTGTGGCTTCACACG
GTGGCGATGTGGTGGGCAAGGTCGTGTAA

Upstream 100 bases:

>100_bases
TCGATGCGCATCACGCGCCTAGTGCGCTGGTGCTTCGCATCGCCCATGCATCTTCAGCGCACGCGGCGATGCCGAACGCT
TCCAGTTCGACTTCCGCATC

Downstream 100 bases:

>100_bases
ACGATGAGCGGGATCGAAGTCTCGTCAAAGAAGATTGCCGACATCATCAGCGTCATCGATGGCATCGCCTTCCAAACCAA
CATTCTTGCGCTGAATGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MVESLNHLMSTADGNLQSLSALLQSIAAGDLTARMSGEFRGVFAQMRDDANATASQLARIVGNIQQSAVSINAAASEIAA
GNQDLSQRTDQQAANLEETAASMEELTSTVRQNAERARQANQLAIGAARVASHGGDVVGKVV

Sequences:

>Translated_142_residues
MVESLNHLMSTADGNLQSLSALLQSIAAGDLTARMSGEFRGVFAQMRDDANATASQLARIVGNIQQSAVSINAAASEIAA
GNQDLSQRTDQQAANLEETAASMEELTSTVRQNAERARQANQLAIGAARVASHGGDVVGKVV
>Mature_142_residues
MVESLNHLMSTADGNLQSLSALLQSIAAGDLTARMSGEFRGVFAQMRDDANATASQLARIVGNIQQSAVSINAAASEIAA
GNQDLSQRTDQQAANLEETAASMEELTSTVRQNAERARQANQLAIGAARVASHGGDVVGKVV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=120, Percent_Identity=49.1666666666667, Blast_Score=103, Evalue=4e-24,
Organism=Escherichia coli, GI1788195, Length=127, Percent_Identity=44.8818897637795, Blast_Score=93, Evalue=6e-21,
Organism=Escherichia coli, GI1787690, Length=127, Percent_Identity=43.3070866141732, Blast_Score=84, Evalue=3e-18,
Organism=Escherichia coli, GI1788194, Length=118, Percent_Identity=44.0677966101695, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 14753; Mature: 14753

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVESLNHLMSTADGNLQSLSALLQSIAAGDLTARMSGEFRGVFAQMRDDANATASQLARI
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHH
VGNIQQSAVSINAAASEIAAGNQDLSQRTDQQAANLEETAASMEELTSTVRQNAERARQA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLAIGAARVASHGGDVVGKVV
HHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MVESLNHLMSTADGNLQSLSALLQSIAAGDLTARMSGEFRGVFAQMRDDANATASQLARI
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHH
VGNIQQSAVSINAAASEIAAGNQDLSQRTDQQAANLEETAASMEELTSTVRQNAERARQA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLAIGAARVASHGGDVVGKVV
HHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]