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The map label for this gene is tse [H]

Identifier: 84623218

GI number: 84623218

Start: 1714737

End: 1715297

Strand: Direct

Name: tse [H]

Synonym: XOO_1561

Alternate gene names: 84623218

Gene position: 1714737-1715297 (Clockwise)

Preceding gene: 84623217

Following gene: 84623222

Centisome position: 34.71

GC content: 59.71

Gene sequence:

>561_bases
ATGAGCGGGATCGAAGTCTCGTCAAAGAAGATTGCCGACATCATCAGCGTCATCGATGGCATCGCCTTCCAAACCAACAT
TCTTGCGCTGAATGCAGCGGTGGAAGCGGCCCGCGCCGGCGAACAAGGCCGTGGTTTCGTGGTGGTGGCCTCTGAGGTGC
GCACGCTCGCGCAACGCTCTTCAGGCGCTGCCAAGGAGATCAATGACCTGATCGACGATTCCGTCCAACGCGTGGCCGAA
GGCTCGGCACTGGTGCACAGCGCCGGCAAGACCATGGGCGATGTGGTGGACAGCGTGCAACGCCTCACCGACATCATGAG
TGAGATTTCGGCGGCATCGCAGGAGCAATCTGCCGGCATCGAACAGGTCAACCAAACCATCACCCACATGGACGAAACCA
CGCAACAGAATGCGGCACTGGTGGAAGAAGCCACGGCTGCCGCACGTTCGATGGAAGAACACTCCGTGCAACTCATCGAC
GCGGGGCCATTTTTAAGATCGATGCACAGCAGAAAGGTCGGGCACATACGCGCGCGGCAGTACCGGTGGCGCATCTGCTG
A

Upstream 100 bases:

>100_bases
GCAGAATGCCGAGCGCGCGCGGCAGGCCAACCAACTGGCGATCGGTGCCGCACGTGTGGCTTCACACGGTGGCGATGTGG
TGGGCAAGGTCGTGTAAACG

Downstream 100 bases:

>100_bases
ACAAGGTTCGCAATGCCTGAGCAACTGCGCGTCGCCCTGGCTGCTGGCACAGGCGCAGCTGGCGCGTGCGTGCCGACGTC
GCTGCCAGCGGCAGTCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFVVVASEVRTLAQRSSGAAKEINDLIDDSVQRVAE
GSALVHSAGKTMGDVVDSVQRLTDIMSEISAASQEQSAGIEQVNQTITHMDETTQQNAALVEEATAAARSMEEHSVQLID
AGPFLRSMHSRKVGHIRARQYRWRIC

Sequences:

>Translated_186_residues
MSGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFVVVASEVRTLAQRSSGAAKEINDLIDDSVQRVAE
GSALVHSAGKTMGDVVDSVQRLTDIMSEISAASQEQSAGIEQVNQTITHMDETTQQNAALVEEATAAARSMEEHSVQLID
AGPFLRSMHSRKVGHIRARQYRWRIC
>Mature_185_residues
SGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFVVVASEVRTLAQRSSGAAKEINDLIDDSVQRVAEG
SALVHSAGKTMGDVVDSVQRLTDIMSEISAASQEQSAGIEQVNQTITHMDETTQQNAALVEEATAAARSMEEHSVQLIDA
GPFLRSMHSRKVGHIRARQYRWRIC

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=173, Percent_Identity=62.4277456647399, Blast_Score=191, Evalue=2e-50,
Organism=Escherichia coli, GI1788194, Length=151, Percent_Identity=66.887417218543, Blast_Score=190, Evalue=6e-50,
Organism=Escherichia coli, GI1788195, Length=141, Percent_Identity=70.9219858156028, Blast_Score=186, Evalue=6e-49,
Organism=Escherichia coli, GI2367378, Length=137, Percent_Identity=69.3430656934307, Blast_Score=179, Evalue=1e-46,
Organism=Escherichia coli, GI1789453, Length=161, Percent_Identity=48.4472049689441, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 19960; Mature: 19828

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFVVVASEVRTLAQRS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHC
SGAAKEINDLIDDSVQRVAEGSALVHSAGKTMGDVVDSVQRLTDIMSEISAASQEQSAGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQVNQTITHMDETTQQNAALVEEATAAARSMEEHSVQLIDAGPFLRSMHSRKVGHIRARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHH
YRWRIC
HHCCCC
>Mature Secondary Structure 
SGIEVSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFVVVASEVRTLAQRS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHC
SGAAKEINDLIDDSVQRVAEGSALVHSAGKTMGDVVDSVQRLTDIMSEISAASQEQSAGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQVNQTITHMDETTQQNAALVEEATAAARSMEEHSVQLIDAGPFLRSMHSRKVGHIRARQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHH
YRWRIC
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]