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The map label for this gene is ybgC [C]

Identifier: 84623205

GI number: 84623205

Start: 1705125

End: 1705583

Strand: Direct

Name: ybgC [C]

Synonym: XOO_1548

Alternate gene names: 84623205

Gene position: 1705125-1705583 (Clockwise)

Preceding gene: 84623204

Following gene: 84623206

Centisome position: 34.52

GC content: 63.18

Gene sequence:

>459_bases
ATGACCACCGCATCCCGCATCCCACATCCCGCATCCCCGTCCATATTCAGTTGGCCGACACGCGTCTACTGGGAAGATAC
CGACGCTGGCGGGGTGGTCTACCACGCGCGCTACGTCGCCTTCATGGAACGTGCGCGCTCGGAGTGGATGCGCGCGCTCG
GTTACGGGCAGGAGCGCACGCGCCAGGAGCACGATCTGGTGTTTGCGGTCCGCTCGATGCAATTGGATTTCCTCAAGCCG
GCCCGGCTCGACGACGCGCTGTCAGTGTCGGCGGTGCTGCTGCGATGCAGACGGGCCAGCCTGCTGTTCGCGCAATCGGT
CCGTCGCGAAGGCGAAGTGCTGCTGACCGCTGAGGTGCGCATTGCCGCACTGGATGCCAGCGACTTCCGCCCGCGTGGCA
TGGACGATGCGCTGTATGACGTGTTGAAAGCTTTAGAAACCACAGAATCCGATTACTGA

Upstream 100 bases:

>100_bases
CCGCGCGACCGCGCTCCGGGCATCGGCGAACCGGGAGACTTGTTCTGATGACGCTGCGTTCGTTGCTCGCCTGGGGCATT
TCGATCGACATTCCTGGCTC

Downstream 100 bases:

>100_bases
GGAACGAACGGATGTCGATTGCATTGCTCCTGGCCCTGCAGGACACGGTAGTGGAAGCACTACCGCAGGACGTCGCCGCT
GCCGCGGCGCAGACCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTTASRIPHPASPSIFSWPTRVYWEDTDAGGVVYHARYVAFMERARSEWMRALGYGQERTRQEHDLVFAVRSMQLDFLKP
ARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVRIAALDASDFRPRGMDDALYDVLKALETTESDY

Sequences:

>Translated_152_residues
MTTASRIPHPASPSIFSWPTRVYWEDTDAGGVVYHARYVAFMERARSEWMRALGYGQERTRQEHDLVFAVRSMQLDFLKP
ARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVRIAALDASDFRPRGMDDALYDVLKALETTESDY
>Mature_151_residues
TTASRIPHPASPSIFSWPTRVYWEDTDAGGVVYHARYVAFMERARSEWMRALGYGQERTRQEHDLVFAVRSMQLDFLKPA
RLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVRIAALDASDFRPRGMDDALYDVLKALETTESDY

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=128, Percent_Identity=42.96875, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17331; Mature: 17200

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASRIPHPASPSIFSWPTRVYWEDTDAGGVVYHARYVAFMERARSEWMRALGYGQERT
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQEHDLVFAVRSMQLDFLKPARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEE
IAALDASDFRPRGMDDALYDVLKALETTESDY
EEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTASRIPHPASPSIFSWPTRVYWEDTDAGGVVYHARYVAFMERARSEWMRALGYGQERT
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RQEHDLVFAVRSMQLDFLKPARLDDALSVSAVLLRCRRASLLFAQSVRREGEVLLTAEVR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEE
IAALDASDFRPRGMDDALYDVLKALETTESDY
EEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]