| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is tolQ [H]
Identifier: 84623206
GI number: 84623206
Start: 1705595
End: 1706374
Strand: Direct
Name: tolQ [H]
Synonym: XOO_1549
Alternate gene names: 84623206
Gene position: 1705595-1706374 (Clockwise)
Preceding gene: 84623205
Following gene: 84623207
Centisome position: 34.52
GC content: 63.46
Gene sequence:
>780_bases ATGTCGATTGCATTGCTCCTGGCCCTGCAGGACACGGTAGTGGAAGCACTACCGCAGGACGTCGCCGCTGCCGCGGCGCA GACCGCCAGCGTGGCGCACAACAGCAGCATCAACTATGTAGACCTGATCCTGCGCGCCAGTATCCCGGTCAAGATCATCG TGTTGCTGCTGCTGATCGGCTCGTTCATCAGCTGGGTGATCATTTTCCGCAAGGCGCGTGCATTCAAGCAGGCCAACCGC GAGGCGGACGAGTTCGAAAACCGCTTCTGGTCCGGTGCGGATCTGGCCAAGCTGTACGCCTCGGCAACCGACCGCAACCG CAGCGTCGGCGGTCTGGAATCGATGTTCGAAGGCGGCTTCCGCGAGTTCTCGCGTCTGCGCGACCGTCGCCGTCTGGATG CACGCGTGCAGCTGGAAGGCGCACAGCGTGCCATGCGTACCGCCTTCACCCGCGAAGTCGATCAGCTGGAGCGCAATCTC GAACTGCTGGCCAACATTGGCTCTACCGCGCCGTACGTCGGCCTGGTCGGTACGGTGTTCGGCATCATGGTGACCATGCA TGACATGGTCAGCAGCGGCGAGCAGGCCGGTATTGCGGCCGTGGCGCCAGGCATTTCCGAAGCGTTGTTCGCCACCGCTA TCGGCCTGTTCGTCGCGATCCCGGCCGTGTGGGCCTACAACCGCTTCACCACGCGCGTGGAACGGCTGTCGGTGCGCTAC GAAACCTTTGCCGACGAGTTCAGCTCCATCCTGCAGCGTCAGGTCGGCGCGGACGAGTGA
Upstream 100 bases:
>100_bases TGGATGCCAGCGACTTCCGCCCGCGTGGCATGGACGATGCGCTGTATGACGTGTTGAAAGCTTTAGAAACCACAGAATCC GATTACTGAGGAACGAACGG
Downstream 100 bases:
>100_bases TGCGCGCTCCCGGCACGCACCCGCTTGCGTCACGCGGGACGTGCTCGGGAGAGCCAGTCGCGTCGATGCGTAGCGCCACG CGCAGGTGCTCCCTACACGG
Product: TolQ protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSIALLLALQDTVVEALPQDVAAAAAQTASVAHNSSINYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANR EADEFENRFWSGADLAKLYASATDRNRSVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQLERNL ELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVAIPAVWAYNRFTTRVERLSVRY ETFADEFSSILQRQVGADE
Sequences:
>Translated_259_residues MSIALLLALQDTVVEALPQDVAAAAAQTASVAHNSSINYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANR EADEFENRFWSGADLAKLYASATDRNRSVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQLERNL ELLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVAIPAVWAYNRFTTRVERLSVRY ETFADEFSSILQRQVGADE >Mature_258_residues SIALLLALQDTVVEALPQDVAAAAAQTASVAHNSSINYVDLILRASIPVKIIVLLLLIGSFISWVIIFRKARAFKQANRE ADEFENRFWSGADLAKLYASATDRNRSVGGLESMFEGGFREFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQLERNLE LLANIGSTAPYVGLVGTVFGIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVAIPAVWAYNRFTTRVERLSVRYE TFADEFSSILQRQVGADE
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=222, Percent_Identity=45.945945945946, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1789381, Length=209, Percent_Identity=32.5358851674641, Blast_Score=81, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 28480; Mature: 28349
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIALLLALQDTVVEALPQDVAAAAAQTASVAHNSSINYVDLILRASIPVKIIVLLLLIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH SFISWVIIFRKARAFKQANREADEFENRFWSGADLAKLYASATDRNRSVGGLESMFEGGF HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH REFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQLERNLELLANIGSTAPYVGLVGTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVAIPAVWAYNRFTTRVERLSVRY HHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFADEFSSILQRQVGADE HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SIALLLALQDTVVEALPQDVAAAAAQTASVAHNSSINYVDLILRASIPVKIIVLLLLIG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHH SFISWVIIFRKARAFKQANREADEFENRFWSGADLAKLYASATDRNRSVGGLESMFEGGF HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH REFSRLRDRRRLDARVQLEGAQRAMRTAFTREVDQLERNLELLANIGSTAPYVGLVGTVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GIMVTMHDMVSSGEQAGIAAVAPGISEALFATAIGLFVAIPAVWAYNRFTTRVERLSVRY HHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFADEFSSILQRQVGADE HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]