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The map label for this gene is yebC [C]

Identifier: 84623200

GI number: 84623200

Start: 1699690

End: 1700418

Strand: Direct

Name: yebC [C]

Synonym: XOO_1543

Alternate gene names: 84623200

Gene position: 1699690-1700418 (Clockwise)

Preceding gene: 84623199

Following gene: 84623201

Centisome position: 34.41

GC content: 66.39

Gene sequence:

>729_bases
ATGGGTAGAGGCCCCTCGATCGAAGGCCGCAAGAACGCCTCCGACGCCAAACGCGGCAAGATGTTCACCAAGATCATCCG
CGAGATCAGCGTAGCCGCGCGCGCTGGCGGCGGCGACCCGTCCAACAATCCGCGTCTGCGCACCGCCATGGACAAGGGCC
TGTCGGCGAACATGTCCAAGGACGTGATCGAGCGCGCCATCAAGAAATCCACCGGCGAGCTGGAAGGCGTGGAATACGAA
GAAGTGCGCTACGAGGGCTATGCGCCCGGCGGCGTGGCGGTGATCGTGGACTGCCTGACCGACAACCGCGTGCGCACCGT
GGCCGACGTGCGCCATGCCTTCAGCAAATGCGGCGGCAACATGGGCACCGAGGGCTCGGTGGCCTTCATGTTCAAGCGCC
TGGGCGTGCTCAGCTTCGCCGCCGGCATCGATGAGGACACCCTCACCGACGCCGCCATTGAAGCCGGCGCCGACGATGTG
GTGGTCTATCCCGAAGACGGCGCCATCGACGTGCTCACCGCCCCGGACGCCTTCGCCCAGGTCAGGGACGCCCTGGCTGC
CGCCGGCCTGGAGCCGGCGCACGCCGAAATCGTCTTTCGCGCCGACAACGACATCGCCGTGGACGGCGACACGGCGGTGC
AGGTCCGCAAGCTGCTGGACATGCTCGAAGACCTGGACGACGTGCAGGACGTGTATTCGAACGTCGATCAAGCGGCGCTT
GGCGCGTAA

Upstream 100 bases:

>100_bases
TTCGGTCGTGAACATGCGCCGGCGGATGTTGTGGCCCCGGTGAGGGCAGGCAATCAGGTAAAATCCGCGCCCTGTCATCC
AAGCCAGTCTGGAACCACCC

Downstream 100 bases:

>100_bases
ATGAAGACGGGGATGGCGGCATTCGGCATTGGGGATGCGCAACAGCGATGCGACCGGCACCCTGCACGTGCATTACCAAT
CCCTAACCTCCCATCCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MGRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSANMSKDVIERAIKKSTGELEGVEYE
EVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGNMGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDV
VVYPEDGAIDVLTAPDAFAQVRDALAAAGLEPAHAEIVFRADNDIAVDGDTAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
GA

Sequences:

>Translated_242_residues
MGRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSANMSKDVIERAIKKSTGELEGVEYE
EVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGNMGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDV
VVYPEDGAIDVLTAPDAFAQVRDALAAAGLEPAHAEIVFRADNDIAVDGDTAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
GA
>Mature_241_residues
GRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSANMSKDVIERAIKKSTGELEGVEYEE
VRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGNMGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDVV
VYPEDGAIDVLTAPDAFAQVRDALAAAGLEPAHAEIVFRADNDIAVDGDTAVQVRKLLDMLEDLDDVQDVYSNVDQAALG
A

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=233, Percent_Identity=26.6094420600858, Blast_Score=88, Evalue=5e-18,
Organism=Escherichia coli, GI1788171, Length=225, Percent_Identity=57.7777777777778, Blast_Score=259, Evalue=1e-70,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=37.1308016877637, Blast_Score=130, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6321458, Length=268, Percent_Identity=30.5970149253731, Blast_Score=103, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24583305, Length=246, Percent_Identity=26.4227642276423, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 25596; Mature: 25465

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSANMSK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHH
DVIERAIKKSTGELEGVEYEEVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGN
HHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCC
MGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDVVVYPEDGAIDVLTAPDAFAQ
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCHHHHH
VRDALAAAGLEPAHAEIVFRADNDIAVDGDTAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
HHHHHHHCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GA
CC
>Mature Secondary Structure 
GRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSANMSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCHH
DVIERAIKKSTGELEGVEYEEVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGN
HHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCC
MGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDVVVYPEDGAIDVLTAPDAFAQ
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCHHHHH
VRDALAAAGLEPAHAEIVFRADNDIAVDGDTAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
HHHHHHHCCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA