Click here to switch to the map view.

The map label for this gene is cyoA [H]

Identifier: 84623172

GI number: 84623172

Start: 1660019

End: 1660954

Strand: Direct

Name: cyoA [H]

Synonym: XOO_1515

Alternate gene names: 84623172

Gene position: 1660019-1660954 (Clockwise)

Preceding gene: 84623171

Following gene: 84623173

Centisome position: 33.6

GC content: 59.19

Gene sequence:

>936_bases
ATGATTCCGCTGAAACAGCTCGGGCGTTTACTTCGTCCAGGCCTGATGTTGCCCTTCCTGCTGCTGGCAGGTTGCAACTC
GGCCATCCTCAATCCGAAAGGCCAGATCGGCCACGACGAAAAGCAACTGCTGATCACCTCGGTGGTGCTGATGCTGATCG
TGGTCATCCCGGTGATCGTGATGACGATTGCGTTCGCGTGGAAATATCGCGCATCCAACACAAAGGCGCGTTACGAGCCG
GATTGGTCGCACTCCACCGCCATCGAAGTGGTGGTGTGGTCGATCCCGTGCGTGATCATCCTGGTGCTGGCGGTGCTGAC
CTGGCGCTCGTCGCACGCGCTGGACCCGTACCGGCCGCTGGATTCGGACGTCAAGCCGATCACGATCGAAGCGGTGTCGC
TGGACTGGAAGTGGATGTTCATCTACCCCGATCAGAACATCGCCACCGTCAATGAGATTGCGTTCCCGGTGCACACGCCG
CTGAACTTCAAGATCACCTCCGACACGGTGATGAACTCGTTCTTCATTCCGCACCTGGGCACCATGATCTACGCGATGGC
GGGCATGGAAACCAAGCTGCATCTGGTGGCCAACGAGCCGGGCGAGTACTTCGGCCTGTCGACCAACTACAGCGGCCACG
GCTTTTCGAAGATGAGCTTCAAGGCGCATGTCACCGATCAGGCTGGCTTCGATGCGTGGGTGGCCAAGGTCAAGGCGTCG
CCGACCGCGTTGAATGCTGCCGAGTACCAGGTGCTGGCTGCCAATCGCAACGACAAGGAACAGTATCCGGTCACCTACTA
CTCGTCGGTGCAGGACGGCATGTTCCGCTCGCTGGTCGACAAATACATGAATGGTCCCGGCCACAGTAAAGGCCACGGCG
ACCATCAGGCATCGGCTATGGAGCCGGTCGCCATGTGCACTTCTGGAGACAAGTGA

Upstream 100 bases:

>100_bases
TCTGCGCAGTTCATCTCCTCCAGGAAGGCAGCTGCGTCGGGAACATCCCAGGACGGATACGACGAACGAGGCTGGCGTTC
CTTCGCACTTGGATCGACCG

Downstream 100 bases:

>100_bases
TGCTAGGCAAACTTACCATTGATGCAGTTCCATACCACGAGCCGATCATCATGGTCGCTCTGGGTGGTGGCGGGCTGCTC
GGCCTGCTCATCGCGGCCGC

Product: cytochrome O ubiquinol oxidase subunit II

Products: Ubiquinone-8; H2O. [C]

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIPLKQLGRLLRPGLMLPFLLLAGCNSAILNPKGQIGHDEKQLLITSVVLMLIVVIPVIVMTIAFAWKYRASNTKARYEP
DWSHSTAIEVVVWSIPCVIILVLAVLTWRSSHALDPYRPLDSDVKPITIEAVSLDWKWMFIYPDQNIATVNEIAFPVHTP
LNFKITSDTVMNSFFIPHLGTMIYAMAGMETKLHLVANEPGEYFGLSTNYSGHGFSKMSFKAHVTDQAGFDAWVAKVKAS
PTALNAAEYQVLAANRNDKEQYPVTYYSSVQDGMFRSLVDKYMNGPGHSKGHGDHQASAMEPVAMCTSGDK

Sequences:

>Translated_311_residues
MIPLKQLGRLLRPGLMLPFLLLAGCNSAILNPKGQIGHDEKQLLITSVVLMLIVVIPVIVMTIAFAWKYRASNTKARYEP
DWSHSTAIEVVVWSIPCVIILVLAVLTWRSSHALDPYRPLDSDVKPITIEAVSLDWKWMFIYPDQNIATVNEIAFPVHTP
LNFKITSDTVMNSFFIPHLGTMIYAMAGMETKLHLVANEPGEYFGLSTNYSGHGFSKMSFKAHVTDQAGFDAWVAKVKAS
PTALNAAEYQVLAANRNDKEQYPVTYYSSVQDGMFRSLVDKYMNGPGHSKGHGDHQASAMEPVAMCTSGDK
>Mature_311_residues
MIPLKQLGRLLRPGLMLPFLLLAGCNSAILNPKGQIGHDEKQLLITSVVLMLIVVIPVIVMTIAFAWKYRASNTKARYEP
DWSHSTAIEVVVWSIPCVIILVLAVLTWRSSHALDPYRPLDSDVKPITIEAVSLDWKWMFIYPDQNIATVNEIAFPVHTP
LNFKITSDTVMNSFFIPHLGTMIYAMAGMETKLHLVANEPGEYFGLSTNYSGHGFSKMSFKAHVTDQAGFDAWVAKVKAS
PTALNAAEYQVLAANRNDKEQYPVTYYSSVQDGMFRSLVDKYMNGPGHSKGHGDHQASAMEPVAMCTSGDK

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=311, Percent_Identity=54.983922829582, Blast_Score=337, Evalue=6e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.- [C]

Molecular weight: Translated: 34505; Mature: 34505

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLKQLGRLLRPGLMLPFLLLAGCNSAILNPKGQIGHDEKQLLITSVVLMLIVVIPVIV
CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MTIAFAWKYRASNTKARYEPDWSHSTAIEVVVWSIPCVIILVLAVLTWRSSHALDPYRPL
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DSDVKPITIEAVSLDWKWMFIYPDQNIATVNEIAFPVHTPLNFKITSDTVMNSFFIPHLG
CCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHEEEEECCCCEEEEECHHHHHHHHHHHHH
TMIYAMAGMETKLHLVANEPGEYFGLSTNYSGHGFSKMSFKAHVTDQAGFDAWVAKVKAS
HHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCC
PTALNAAEYQVLAANRNDKEQYPVTYYSSVQDGMFRSLVDKYMNGPGHSKGHGDHQASAM
CCEECCCCEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC
EPVAMCTSGDK
CHHHHCCCCCC
>Mature Secondary Structure
MIPLKQLGRLLRPGLMLPFLLLAGCNSAILNPKGQIGHDEKQLLITSVVLMLIVVIPVIV
CCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MTIAFAWKYRASNTKARYEPDWSHSTAIEVVVWSIPCVIILVLAVLTWRSSHALDPYRPL
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DSDVKPITIEAVSLDWKWMFIYPDQNIATVNEIAFPVHTPLNFKITSDTVMNSFFIPHLG
CCCCCEEEEEEEEEEEEEEEEECCCCCCCHHHEEEEECCCCEEEEECHHHHHHHHHHHHH
TMIYAMAGMETKLHLVANEPGEYFGLSTNYSGHGFSKMSFKAHVTDQAGFDAWVAKVKAS
HHHHHHHCCCEEEEEEECCCCCEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCC
PTALNAAEYQVLAANRNDKEQYPVTYYSSVQDGMFRSLVDKYMNGPGHSKGHGDHQASAM
CCEECCCCEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHC
EPVAMCTSGDK
CHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ubiquinol-8; O(2) [C]

Specific reaction: Ubiquinol-8 + O(2) = Ubiquinone-8 + H2O. [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]