| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84623118
Identifier: 84623118
GI number: 84623118
Start: 1597714
End: 1598082
Strand: Direct
Name: 84623118
Synonym: XOO_1461
Alternate gene names: NA
Gene position: 1597714-1598082 (Clockwise)
Preceding gene: 84623117
Following gene: 84623120
Centisome position: 32.34
GC content: 46.07
Gene sequence:
>369_bases ATGAAACCCAATGAAATTCAACGCTGGGCTCAGACTTACATTGAGGCACAGAGCCGCGAGATCACCAATACCGAAGATCC ACTTTGGTGGGCTATAGATCTATTTTTCGAACTAATGGAATCAAAGCCAGAAGCCTGCTGGGAAGTCCTTGTGGAAATAA GCCGACGCAATCCACCGGAAGGCGTGATCCGTATTGCGGGCGCTGGACCGCTTGAAGATTTAATTGACTCTCATGGCAAT CGCTTTATCGATCAAATAGAAGTTGAAGCTGAGCGAAATTTGGTTTTCAGGAAAATGCTTGACGCAGTTTGGGAAAGTAG CGACAACACAACCTGGTCAAGAATTATGGAGATCAGATCCCAGAAGTGA
Upstream 100 bases:
>100_bases ACGCTCTAAGAAGGGTGCGAATGTACTGCAAGCCATTACCAGCCGAGTATGGCGAATGGGAACGCGTTGCGAATTTAAAC GCACCAGGCTTTTAAAAATC
Downstream 100 bases:
>100_bases TAATTGACCTAAATCCCTTAGATCTATTCAGCAACAACTACTAGGGAAGGTCTGAACAACCCATAAAACCTCTAAAATTC CAGCTTCTTGCATTTCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKPNEIQRWAQTYIEAQSREITNTEDPLWWAIDLFFELMESKPEACWEVLVEISRRNPPEGVIRIAGAGPLEDLIDSHGN RFIDQIEVEAERNLVFRKMLDAVWESSDNTTWSRIMEIRSQK
Sequences:
>Translated_122_residues MKPNEIQRWAQTYIEAQSREITNTEDPLWWAIDLFFELMESKPEACWEVLVEISRRNPPEGVIRIAGAGPLEDLIDSHGN RFIDQIEVEAERNLVFRKMLDAVWESSDNTTWSRIMEIRSQK >Mature_122_residues MKPNEIQRWAQTYIEAQSREITNTEDPLWWAIDLFFELMESKPEACWEVLVEISRRNPPEGVIRIAGAGPLEDLIDSHGN RFIDQIEVEAERNLVFRKMLDAVWESSDNTTWSRIMEIRSQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14363; Mature: 14363
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPNEIQRWAQTYIEAQSREITNTEDPLWWAIDLFFELMESKPEACWEVLVEISRRNPPE CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC GVIRIAGAGPLEDLIDSHGNRFIDQIEVEAERNLVFRKMLDAVWESSDNTTWSRIMEIRS CEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC QK CC >Mature Secondary Structure MKPNEIQRWAQTYIEAQSREITNTEDPLWWAIDLFFELMESKPEACWEVLVEISRRNPPE CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC GVIRIAGAGPLEDLIDSHGNRFIDQIEVEAERNLVFRKMLDAVWESSDNTTWSRIMEIRS CEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC QK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA