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The map label for this gene is rhsA [H]

Identifier: 84623117

GI number: 84623117

Start: 1596200

End: 1597708

Strand: Direct

Name: rhsA [H]

Synonym: XOO_1460

Alternate gene names: 84623117

Gene position: 1596200-1597708 (Clockwise)

Preceding gene: 84623116

Following gene: 84623118

Centisome position: 32.31

GC content: 59.18

Gene sequence:

>1509_bases
ATGCAAGCTGATGCTGGCGACGGTCAGTTGCGGCAGCCCCAGCTACGCCTCGTTCGGCCGCTCCTCCAGCTAGCCTACGG
CAATGGCCGCACCCTCGCTCGCCAGTACGATCTGGACTACCGCCCGCGGGCCATCCAGGACACCCGCCCGGGTGGGCTGG
AGGTGGGCTTCGGCTTCGACCCGGCCGGCAACCTCACCGCGCTGACGCCGGCAGGCAACACCACACCGGAAATTGGGCTG
GGCTACGACACCCTGGGCCGCCTGACCGGACTCAAGGACGGCCGCACCGGCACGCTGATCGACGGCTACAGCTACGATGC
CACCGGCAACCGCCTCAGCGCCAAGGTCGGCACGGCCACGCAGATCTACACCTATCCAACCGACAGCCATCGCCTGCGTG
CGGTAGCGAGCGTGGCACGCACGTACGACAAGACGGGCAACACGCTGACGATCGGCGGCAAAGCAAGAGAGTTCTTCTAC
GATGCCTCCGGCCGCATGAGCATGGCCAAGCGTGCCGGCGCGCTGGTGATGAACTACCGCTACAACGGTAAAGGCGAACA
GGTGCAGCGCTTCCTCGGCACCACCAACACCTACACGCTCTACGATGAAGCCGGCCACTGGCTGGGCGACTACGACAGCA
ACGGTGCGCCCAAGCAGCAGGCGATCTGGTTGGATGATCTACCGGTCGGCCTGCTGGCTAACGCCAACAAGCTGCACTAC
ATCGAACCCGATCACCTGGGCAGCTCACGCGTGGTGATCGACCCCACCCGCAATGTGGCGGTGTGGACGTGGAGCTTGAA
GGGCGAAGCCTTCGGCAACACCGCGCCGAATCAGGATCCGGATGGCGATGGTGCAGCGCTGGTGTTGGATATGCGCTTCC
CGGGGCAGCGGTTTGATGCGGCGAGTGGGTTGAATTACAACTACTTCCGTGACTATGAAGCGGCTACGGGCAGGTATGGG
CAGAGTGATCCGATTGGTCTAGAAGGTGGATTTAGTTCCTACGCCTATGTCAGCTCTAGACCTCTAAGCAGCGTAGATCA
TAACGGACTGCAAGCTATTCCTCTTCCTATGCCGCTTCCCATCGGACCTCCAGGATTCGGTGAAGGAGAAAATGGCATGG
ATGATTTTGGTGGCCCGCGTCTACCGGAGCCGACCGCAGCGGGAGTGTTTGGCGGACTTTATCAAATTTCCAAGACAACA
CCTGGTTTTTCGTTGCTTGATCAGTCGCTCACAATAGCCAACGCACTATGCCCTGAAAACAATGACGAGCTCTGCGAAAA
AGCAAAGACAGATGCACGAAACGCCCATTTTAAACTGATCACAAAAAGAATCCCTCAATTCCAAACGGGTGGGACTAGAG
GTCGCGACCCTGGCCACTTACAGGCAATAATTCAATTGCAAGCGCGTCTGCGCGACGCTCTAAGAAGGGTGCGAATGTAC
TGCAAGCCATTACCAGCCGAGTATGGCGAATGGGAACGCGTTGCGAATTTAAACGCACCAGGCTTTTAA

Upstream 100 bases:

>100_bases
GATGACATGATCATTACCAATGATATCCAGGCAAATTTAATAATAAATTACCTGAGTACCAGCTTTAAACTTAATACAAA
CCTGTATAGGGGAATTTAGT

Downstream 100 bases:

>100_bases
AAATCATGAAACCCAATGAAATTCAACGCTGGGCTCAGACTTACATTGAGGCACAGAGCCGCGAGATCACCAATACCGAA
GATCCACTTTGGTGGGCTAT

Product: putative Rhs-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MQADAGDGQLRQPQLRLVRPLLQLAYGNGRTLARQYDLDYRPRAIQDTRPGGLEVGFGFDPAGNLTALTPAGNTTPEIGL
GYDTLGRLTGLKDGRTGTLIDGYSYDATGNRLSAKVGTATQIYTYPTDSHRLRAVASVARTYDKTGNTLTIGGKAREFFY
DASGRMSMAKRAGALVMNYRYNGKGEQVQRFLGTTNTYTLYDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLLANANKLHY
IEPDHLGSSRVVIDPTRNVAVWTWSLKGEAFGNTAPNQDPDGDGAALVLDMRFPGQRFDAASGLNYNYFRDYEAATGRYG
QSDPIGLEGGFSSYAYVSSRPLSSVDHNGLQAIPLPMPLPIGPPGFGEGENGMDDFGGPRLPEPTAAGVFGGLYQISKTT
PGFSLLDQSLTIANALCPENNDELCEKAKTDARNAHFKLITKRIPQFQTGGTRGRDPGHLQAIIQLQARLRDALRRVRMY
CKPLPAEYGEWERVANLNAPGF

Sequences:

>Translated_502_residues
MQADAGDGQLRQPQLRLVRPLLQLAYGNGRTLARQYDLDYRPRAIQDTRPGGLEVGFGFDPAGNLTALTPAGNTTPEIGL
GYDTLGRLTGLKDGRTGTLIDGYSYDATGNRLSAKVGTATQIYTYPTDSHRLRAVASVARTYDKTGNTLTIGGKAREFFY
DASGRMSMAKRAGALVMNYRYNGKGEQVQRFLGTTNTYTLYDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLLANANKLHY
IEPDHLGSSRVVIDPTRNVAVWTWSLKGEAFGNTAPNQDPDGDGAALVLDMRFPGQRFDAASGLNYNYFRDYEAATGRYG
QSDPIGLEGGFSSYAYVSSRPLSSVDHNGLQAIPLPMPLPIGPPGFGEGENGMDDFGGPRLPEPTAAGVFGGLYQISKTT
PGFSLLDQSLTIANALCPENNDELCEKAKTDARNAHFKLITKRIPQFQTGGTRGRDPGHLQAIIQLQARLRDALRRVRMY
CKPLPAEYGEWERVANLNAPGF
>Mature_502_residues
MQADAGDGQLRQPQLRLVRPLLQLAYGNGRTLARQYDLDYRPRAIQDTRPGGLEVGFGFDPAGNLTALTPAGNTTPEIGL
GYDTLGRLTGLKDGRTGTLIDGYSYDATGNRLSAKVGTATQIYTYPTDSHRLRAVASVARTYDKTGNTLTIGGKAREFFY
DASGRMSMAKRAGALVMNYRYNGKGEQVQRFLGTTNTYTLYDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLLANANKLHY
IEPDHLGSSRVVIDPTRNVAVWTWSLKGEAFGNTAPNQDPDGDGAALVLDMRFPGQRFDAASGLNYNYFRDYEAATGRYG
QSDPIGLEGGFSSYAYVSSRPLSSVDHNGLQAIPLPMPLPIGPPGFGEGENGMDDFGGPRLPEPTAAGVFGGLYQISKTT
PGFSLLDQSLTIANALCPENNDELCEKAKTDARNAHFKLITKRIPQFQTGGTRGRDPGHLQAIIQLQARLRDALRRVRMY
CKPLPAEYGEWERVANLNAPGF

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1790020, Length=130, Percent_Identity=36.1538461538462, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786917, Length=146, Percent_Identity=35.6164383561644, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994942, Length=116, Percent_Identity=36.2068965517241, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1786706, Length=116, Percent_Identity=36.2068965517241, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 54646; Mature: 54646

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADAGDGQLRQPQLRLVRPLLQLAYGNGRTLARQYDLDYRPRAIQDTRPGGLEVGFGFD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCC
PAGNLTALTPAGNTTPEIGLGYDTLGRLTGLKDGRTGTLIDGYSYDATGNRLSAKVGTAT
CCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECEEECCCCCEEEEECCCCE
QIYTYPTDSHRLRAVASVARTYDKTGNTLTIGGKAREFFYDASGRMSMAKRAGALVMNYR
EEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHCCEEEEEEE
YNGKGEQVQRFLGTTNTYTLYDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLLANANKLHY
ECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCEEEE
IEPDHLGSSRVVIDPTRNVAVWTWSLKGEAFGNTAPNQDPDGDGAALVLDMRFPGQRFDA
ECCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
ASGLNYNYFRDYEAATGRYGQSDPIGLEGGFSSYAYVSSRPLSSVDHNGLQAIPLPMPLP
CCCCCCHHEECCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCC
IGPPGFGEGENGMDDFGGPRLPEPTAAGVFGGLYQISKTTPGFSLLDQSLTIANALCPEN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCC
NDELCEKAKTDARNAHFKLITKRIPQFQTGGTRGRDPGHLQAIIQLQARLRDALRRVRMY
CHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CKPLPAEYGEWERVANLNAPGF
HCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MQADAGDGQLRQPQLRLVRPLLQLAYGNGRTLARQYDLDYRPRAIQDTRPGGLEVGFGFD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCC
PAGNLTALTPAGNTTPEIGLGYDTLGRLTGLKDGRTGTLIDGYSYDATGNRLSAKVGTAT
CCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECEEECCCCCEEEEECCCCE
QIYTYPTDSHRLRAVASVARTYDKTGNTLTIGGKAREFFYDASGRMSMAKRAGALVMNYR
EEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHCCEEEEEEE
YNGKGEQVQRFLGTTNTYTLYDEAGHWLGDYDSNGAPKQQAIWLDDLPVGLLANANKLHY
ECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCEEEE
IEPDHLGSSRVVIDPTRNVAVWTWSLKGEAFGNTAPNQDPDGDGAALVLDMRFPGQRFDA
ECCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
ASGLNYNYFRDYEAATGRYGQSDPIGLEGGFSSYAYVSSRPLSSVDHNGLQAIPLPMPLP
CCCCCCHHEECCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCC
IGPPGFGEGENGMDDFGGPRLPEPTAAGVFGGLYQISKTTPGFSLLDQSLTIANALCPEN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCC
NDELCEKAKTDARNAHFKLITKRIPQFQTGGTRGRDPGHLQAIIQLQARLRDALRRVRMY
CHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CKPLPAEYGEWERVANLNAPGF
HCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2403547; 8041620; 9278503; 7934896 [H]