Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is ybhG [C]

Identifier: 84623107

GI number: 84623107

Start: 1579151

End: 1580254

Strand: Direct

Name: ybhG [C]

Synonym: XOO_1450

Alternate gene names: 84623107

Gene position: 1579151-1580254 (Clockwise)

Preceding gene: 84623106

Following gene: 84623108

Centisome position: 31.97

GC content: 69.57

Gene sequence:

>1104_bases
ATGACGATGTTTTATCGCGGCCTGGTGTGCGGCACGTTGCTGCTGGCACTAGCCGCCTGCAGCGGGCCGGACGCGCCCGC
CACCGAGACGCCGCGCGCGGTGAAGCTGGAGCGCTTTGGCGCCGGCAGCGATAGCCCACTGCAGGTGCCGGCGCTGGTGC
GCCAGGAACAACGCGCCGAGTTGGCGTTCGAAGGGGCGGGCCGTCTTTCTGCGGTATTGGTGGATGTGGGCGACCGCGTG
ACCCGCGGGCAGGTGCTGGCGCGCCTGGACGATGAACCGCTGCGGCTGCGCGAACAGCAGGCCGACGCACATGTGCGCGC
GGCGCTGGCGCAGTCTGGCGAGCGGCAACTGCAACTGCGCCAACAACAGGCGATGTTCGATGACGGTGCCAGTTCTCATG
CCACCTTGACTGCCGCGCGCGCAGCGGCCGATGCCGCCAGCGCGCAGTTGCAGGCGTCCAGGGCCGACCTGGCCATGGCC
CGCCGTGGTACGCGTCTGGGCGAATTGCGCGCGCCGTTCGATGGCAGCGTGGTGGCACGTCTGCAACAGCCGCAGGCCGA
TGTGGCAGCGGGGCAGACGGTGCTGCAGGTGGAAGGGCAGGGCCATGTGCAACTGGTCGCCACGCTGCCGGCAGCTGCCG
GCCCCGATCTGGTGCCCGGGCAAACCGTGCGCGCGCGTCTGGCTGATGTAGGCGCCTTGCCGATCGCGCTGCGTGTGCGC
AGTCTTTCCAACCGCCTGGACAATGCCGCAACGGTACAGGCGTTGCTCGAGCCGGTCGCTGTAGCGCCTGCGCTGCGCAG
CGGCGACAGCGTGCTGCTGGCATTGCCCACACGTGCCGCTTCCACGCCCAGCGTGCCGTTGTCGGCGGTCGTGCCGTGGC
TCAATCGGCAACAGGCCAGCGTGTTCGTTTACCAGCCGGCGAAGCGGGCCGTGATCGAACGTGCGGTCGACCTGGGGACG
ATCGTCGGCGAGCGCGTCCAGATCCTGCGCGGGCTGCGTGCAGGCGAGCAGGTCGTCAGCGCCGGGGTGGGCTTTCTGGT
GAGCGGCCAGCCGGTGACACCACTGCAGGTACAGACCCAACTGAGCGGAGGTCGCTTGCCATGA

Upstream 100 bases:

>100_bases
AACGCCGAAGACAGCCCGCTGGTGGCACGCCGCGCGGTGGTCGGCGGCACCTTTGCACTGACCTACAGCCGCTGAGCGGC
ACAGACCGGGGGATCGAAGG

Downstream 100 bases:

>100_bases
AGCTGACCCAGATGGCGATGCGCTCGAGCCGGCTGACGTTGTTTGCGGCAGCGCTGATCCTGATCGGCGGCATCGTGGCG
TTTGTCGGCTTCCCCTCGCA

Product: RND efflux membrane fusion protein

Products: NA

Alternate protein names: RND Efflux Membrane Fusion Protein; RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; Membrane Fusion Protein; AcrA/E Family Efflux Transporter MFP Subunit; Protein Secretion Protein; Efflux Transmembrane Protein; Auxiliary Transport Protein MFP Family; RND/Acr Family Transmembrane Transporter; Lipoprotein

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTMFYRGLVCGTLLLALAACSGPDAPATETPRAVKLERFGAGSDSPLQVPALVRQEQRAELAFEGAGRLSAVLVDVGDRV
TRGQVLARLDDEPLRLREQQADAHVRAALAQSGERQLQLRQQQAMFDDGASSHATLTAARAAADAASAQLQASRADLAMA
RRGTRLGELRAPFDGSVVARLQQPQADVAAGQTVLQVEGQGHVQLVATLPAAAGPDLVPGQTVRARLADVGALPIALRVR
SLSNRLDNAATVQALLEPVAVAPALRSGDSVLLALPTRAASTPSVPLSAVVPWLNRQQASVFVYQPAKRAVIERAVDLGT
IVGERVQILRGLRAGEQVVSAGVGFLVSGQPVTPLQVQTQLSGGRLP

Sequences:

>Translated_367_residues
MTMFYRGLVCGTLLLALAACSGPDAPATETPRAVKLERFGAGSDSPLQVPALVRQEQRAELAFEGAGRLSAVLVDVGDRV
TRGQVLARLDDEPLRLREQQADAHVRAALAQSGERQLQLRQQQAMFDDGASSHATLTAARAAADAASAQLQASRADLAMA
RRGTRLGELRAPFDGSVVARLQQPQADVAAGQTVLQVEGQGHVQLVATLPAAAGPDLVPGQTVRARLADVGALPIALRVR
SLSNRLDNAATVQALLEPVAVAPALRSGDSVLLALPTRAASTPSVPLSAVVPWLNRQQASVFVYQPAKRAVIERAVDLGT
IVGERVQILRGLRAGEQVVSAGVGFLVSGQPVTPLQVQTQLSGGRLP
>Mature_366_residues
TMFYRGLVCGTLLLALAACSGPDAPATETPRAVKLERFGAGSDSPLQVPALVRQEQRAELAFEGAGRLSAVLVDVGDRVT
RGQVLARLDDEPLRLREQQADAHVRAALAQSGERQLQLRQQQAMFDDGASSHATLTAARAAADAASAQLQASRADLAMAR
RGTRLGELRAPFDGSVVARLQQPQADVAAGQTVLQVEGQGHVQLVATLPAAAGPDLVPGQTVRARLADVGALPIALRVRS
LSNRLDNAATVQALLEPVAVAPALRSGDSVLLALPTRAASTPSVPLSAVVPWLNRQQASVFVYQPAKRAVIERAVDLGTI
VGERVQILRGLRAGEQVVSAGVGFLVSGQPVTPLQVQTQLSGGRLP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane-associated. Inner membrane [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38400; Mature: 38269

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMFYRGLVCGTLLLALAACSGPDAPATETPRAVKLERFGAGSDSPLQVPALVRQEQRAE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEECHHHHHHHHHHH
LAFEGAGRLSAVLVDVGDRVTRGQVLARLDDEPLRLREQQADAHVRAALAQSGERQLQLR
HHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QQQAMFDDGASSHATLTAARAAADAASAQLQASRADLAMARRGTRLGELRAPFDGSVVAR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LQQPQADVAAGQTVLQVEGQGHVQLVATLPAAAGPDLVPGQTVRARLADVGALPIALRVR
HCCCCHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
SLSNRLDNAATVQALLEPVAVAPALRSGDSVLLALPTRAASTPSVPLSAVVPWLNRQQAS
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCE
VFVYQPAKRAVIERAVDLGTIVGERVQILRGLRAGEQVVSAGVGFLVSGQPVTPLQVQTQ
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEE
LSGGRLP
CCCCCCC
>Mature Secondary Structure 
TMFYRGLVCGTLLLALAACSGPDAPATETPRAVKLERFGAGSDSPLQVPALVRQEQRAE
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCEECHHHHHHHHHHH
LAFEGAGRLSAVLVDVGDRVTRGQVLARLDDEPLRLREQQADAHVRAALAQSGERQLQLR
HHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QQQAMFDDGASSHATLTAARAAADAASAQLQASRADLAMARRGTRLGELRAPFDGSVVAR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LQQPQADVAAGQTVLQVEGQGHVQLVATLPAAAGPDLVPGQTVRARLADVGALPIALRVR
HCCCCHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
SLSNRLDNAATVQALLEPVAVAPALRSGDSVLLALPTRAASTPSVPLSAVVPWLNRQQAS
HHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCE
VFVYQPAKRAVIERAVDLGTIVGERVQILRGLRAGEQVVSAGVGFLVSGQPVTPLQVQTQ
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEE
LSGGRLP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA