Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is insI1 [C]

Identifier: 84623075

GI number: 84623075

Start: 1543116

End: 1544090

Strand: Direct

Name: insI1 [C]

Synonym: XOO_1418

Alternate gene names: 84623075

Gene position: 1543116-1544090 (Clockwise)

Preceding gene: 84623074

Following gene: 84623078

Centisome position: 31.24

GC content: 62.67

Gene sequence:

>975_bases
ATGTCATCCAGCCGCCTTGACCTATCGGAACGATACCGTCTGCATGCGTTATATGAAACCGGGATGTCGATGCGCGCCAT
CGCCGATGTATTGGCGCGTGCGCCCAGCACGATCAGTCGTGAGCTGCGCCGCAATCAGCACGCTGCGCGGTACCAGCCCG
ATCACGCGCAGCGCATCAGCGCCCATCGGCGCACGCACGCCAGCCGGCGTCCACGCATCGACGCTGAGCGTATCGGCCAG
ATCGAGGTCCTGCTGAGGGAGGACGCCAGTCCCGAACAGATCGCCGGCCGCACCGGCTTGGCCAGTCACGCATGGATCTA
TCGGCACATCGACGCCGACCAGAAGCTTGGTGGTCAGCTGTTCATGCATCTACGCAAACGCCGCCGCAAGCGCCGTCGGC
GTGGCGTGCGCGATGGCCGCGGGCAGCTGACGCATCGGCGCAGCTGGACACAGCGCCCAAGCGTGGTTGAGCAGCGAAGC
CGCATCGGCGACTGGGAGCTGGAGACCATCAGGGCCTCGCACGGACGCGCCGTGGTGGTCAGCATGACCGAACGCTGCAG
TGGCCTGCATCTGCTGGCTTATTCACCCGACGGCACCGCCGAGAACGTGCGCAACGCCATTGTCCAGCGACTGGGCGGCC
TGCGCCATGCAGTTCACACCCTCACCGCCGACAACGGCAAGGAGTTCGCCGATCATCGGCTCATTGCCGCCTGCCTGCAG
AGCGATTTCTATTTCGCAGATCCCTACTGCCCATGGCAGCGCGGCAGCAACGAGAATGCCAACGGATTGACACGCCAATA
CTTGCCACGGCAGACCGATGTCAGCACGCATCACCGATGCGCACCTGCGATGGATCGAGCAGCGGCTCTACAATCGTCCG
CGCAAGATACTTGGATTCAAAACGCCCCTCGAAGTCTTCTCCGAGGAGGTCCTCAAAAGCGTTGCGAATCAGAGTTGAAT
TCGCCATTGAAATAA

Upstream 100 bases:

>100_bases
TCTGGGAGAGGGCGGCTTCAACTCTGGATCGCAACACCAACGGTTGTGACGTGGTCCAGGCGACCTGACCTGAGCACTTC
ACCGCCAAGTGGAGTTGCCC

Downstream 100 bases:

>100_bases
CCCATCACGATGCGCCGCGTTCTTTCGCATGCGGTGCGTGCGTCTCGCTATTTCCATCGCATGCCGCGCATGGGGAAGAT
GCCGGCGTCGTTGCCAGGCA

Product: IS1112 transposase

Products: NA

Alternate protein names: Transposon TN4551 [H]

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNQHAARYQPDHAQRISAHRRTHASRRPRIDAERIGQ
IEVLLREDASPEQIAGRTGLASHAWIYRHIDADQKLGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRS
RIGDWELETIRASHGRAVVVSMTERCSGLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQ
SDFYFADPYCPWQRGSNENANGLTRQYLPRQTDVSTHHRCAPAMDRAAALQSSAQDTWIQNAPRSLLRGGPQKRCESELN
SPLK

Sequences:

>Translated_324_residues
MSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNQHAARYQPDHAQRISAHRRTHASRRPRIDAERIGQ
IEVLLREDASPEQIAGRTGLASHAWIYRHIDADQKLGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRS
RIGDWELETIRASHGRAVVVSMTERCSGLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQ
SDFYFADPYCPWQRGSNENANGLTRQYLPRQTDVSTHHRCAPAMDRAAALQSSAQDTWIQNAPRSLLRGGPQKRCESELN
SPLK
>Mature_323_residues
SSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNQHAARYQPDHAQRISAHRRTHASRRPRIDAERIGQI
EVLLREDASPEQIAGRTGLASHAWIYRHIDADQKLGGQLFMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSR
IGDWELETIRASHGRAVVVSMTERCSGLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQS
DFYFADPYCPWQRGSNENANGLTRQYLPRQTDVSTHHRCAPAMDRAAALQSSAQDTWIQNAPRSLLRGGPQKRCESELNS
PLK

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=333, Percent_Identity=28.8288288288288, Blast_Score=101, Evalue=8e-23,
Organism=Escherichia coli, GI1790736, Length=333, Percent_Identity=28.8288288288288, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787671, Length=333, Percent_Identity=28.8288288288288, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 36974; Mature: 36843

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNQHAARYQPDHAQRIS
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
AHRRTHASRRPRIDAERIGQIEVLLREDASPEQIAGRTGLASHAWIYRHIDADQKLGGQL
HHHHHHHHCCCCCCHHHCCCEEEEEECCCCHHHHHCCCCCCHHHHHEEECCCHHHHHHHH
FMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGRAVVV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEE
SMTERCSGLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQ
EEHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SDFYFADPYCPWQRGSNENANGLTRQYLPRQTDVSTHHRCAPAMDRAAALQSSAQDTWIQ
CCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NAPRSLLRGGPQKRCESELNSPLK
HCCHHHHCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SSSRLDLSERYRLHALYETGMSMRAIADVLARAPSTISRELRRNQHAARYQPDHAQRIS
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
AHRRTHASRRPRIDAERIGQIEVLLREDASPEQIAGRTGLASHAWIYRHIDADQKLGGQL
HHHHHHHHCCCCCCHHHCCCEEEEEECCCCHHHHHCCCCCCHHHHHEEECCCHHHHHHHH
FMHLRKRRRKRRRRGVRDGRGQLTHRRSWTQRPSVVEQRSRIGDWELETIRASHGRAVVV
HHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEEE
SMTERCSGLHLLAYSPDGTAENVRNAIVQRLGGLRHAVHTLTADNGKEFADHRLIAACLQ
EEHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SDFYFADPYCPWQRGSNENANGLTRQYLPRQTDVSTHHRCAPAMDRAAALQSSAQDTWIQ
CCCEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NAPRSLLRGGPQKRCESELNSPLK
HCCHHHHCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2820936 [H]