| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623078
Identifier: 84623078
GI number: 84623078
Start: 1549396
End: 1549806
Strand: Direct
Name: 84623078
Synonym: XOO_1421
Alternate gene names: NA
Gene position: 1549396-1549806 (Clockwise)
Preceding gene: 84623075
Following gene: 84623079
Centisome position: 31.36
GC content: 65.45
Gene sequence:
>411_bases ATGCCTCCACCGACCCTTCGTCATCTTCTCGACCGCTTCGGTGCGACCGGGTCGCTGCTGTGCGCCTTGCACTGCGCGGT ATTGCCGCTGGTGCTGGCCCTGGCGCCCTCGTTGGGCCTGTCGTTCTGGCTGGGCGATGGGGTGGAACTGGCCATCGTGG TGTTCGTGACGCTGCTGGGCCTTTTCAGCCTGGTGCTCGGGTATCGCCGGCACAAAGCGCTGCATGCGCTGGCATTGCTG CTGCCCGGCCTGGCGCTGCTATGGGTCGGCCTGTTGTACGACCCGCTGCATCATTCGGTGGTGCCGCATGCGGTGGTGAT GACGCTGGGCGGCGCCCTGGTCGGCATCGCGCACTTGGTCAATTTGCGCCTGAATCATGGGCATGTCCATGACGCCAGCT GCGCGCACTAA
Upstream 100 bases:
>100_bases CCGGCGGCGAAGGCCTGCACGGCTGCGCGATGCAATGATGCAGGCTGAAACAGTAAAACGTAATATTATTCCACATCGCC GCGAGCACCTGCTGGACCTC
Downstream 100 bases:
>100_bases GAACCGCTGGCAAGGCGGCTGCGTAGCCTCCGGGCCAATGCGGATGGCAGCCGGAATCGGCCTCTGCCACTCGCACGTTC GGGTTGATCGGCGGCTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MPPPTLRHLLDRFGATGSLLCALHCAVLPLVLALAPSLGLSFWLGDGVELAIVVFVTLLGLFSLVLGYRRHKALHALALL LPGLALLWVGLLYDPLHHSVVPHAVVMTLGGALVGIAHLVNLRLNHGHVHDASCAH
Sequences:
>Translated_136_residues MPPPTLRHLLDRFGATGSLLCALHCAVLPLVLALAPSLGLSFWLGDGVELAIVVFVTLLGLFSLVLGYRRHKALHALALL LPGLALLWVGLLYDPLHHSVVPHAVVMTLGGALVGIAHLVNLRLNHGHVHDASCAH >Mature_135_residues PPPTLRHLLDRFGATGSLLCALHCAVLPLVLALAPSLGLSFWLGDGVELAIVVFVTLLGLFSLVLGYRRHKALHALALLL PGLALLWVGLLYDPLHHSVVPHAVVMTLGGALVGIAHLVNLRLNHGHVHDASCAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14436; Mature: 14304
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPTLRHLLDRFGATGSLLCALHCAVLPLVLALAPSLGLSFWLGDGVELAIVVFVTLLG CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHH LFSLVLGYRRHKALHALALLLPGLALLWVGLLYDPLHHSVVPHAVVMTLGGALVGIAHLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLRLNHGHVHDASCAH HHHCCCCCCCCCCCCC >Mature Secondary Structure PPPTLRHLLDRFGATGSLLCALHCAVLPLVLALAPSLGLSFWLGDGVELAIVVFVTLLG CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHH LFSLVLGYRRHKALHALALLLPGLALLWVGLLYDPLHHSVVPHAVVMTLGGALVGIAHLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLRLNHGHVHDASCAH HHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA