| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is creC [H]
Identifier: 84623035
GI number: 84623035
Start: 1506563
End: 1507273
Strand: Direct
Name: creC [H]
Synonym: XOO_1378
Alternate gene names: 84623035
Gene position: 1506563-1507273 (Clockwise)
Preceding gene: 84623022
Following gene: 84623036
Centisome position: 30.5
GC content: 62.73
Gene sequence:
>711_bases TTGGAACTTGAGTCGGCCCTGGAAGGCAAGGCCTATGTTGTGCAATACCTGCAGTCGTTGACGCACGAGATGAAACGTCC GCTTGCGGTGATTCGCAGCGCATCCGAGTTGTTGACCGAGCCGGTGCTGGAAACCGATCGCCAGCACTTTGTGGCCAGTA TCCGCGCGCAGGAACAGCGGCTCACCGAAACCATCGACAAGCTGCTGGCGCTGGCCGAAGTGGAGCAGCATGGCTGGCTG CAGACGCGCGAACGCATCGGTCTCAGGAGGCTGCCACAGGCTGCTGCGGAGGCGATATCGCTGCGTGCTGCGGCGACTGG CGTGATGGTGGACGTCGATGCAAGCGCTGCGACCTCAGGCGATCACCACGTACTCGGTGATGGCTTCCTGCTGCGTCAGG CATTGATCAATCTGCTGGAAAACGCCATCGCGTTTTCGCCGCAGGACAGCTGCGTGCGTCTGCATCCGCAGCTGCACGAT GAACATTGGGAGTTGGCGGACGAAGACCGTGGCAGCGGCGTGCCGGATTACGCGATCGAGCGCGTCTTCGAGCGTTTCTA TTCGCTGGCACTCCCGCAGACCGGCCAACGCGGCTCGGGCTTTGGTCTGCCGTTCGTGGGTGAGGTGGCGCGCCTGCATG GTGGGGACGTCACACCAGGCAATCGCGACGGCGGTGGTGCGATGGCGATGTTGCCCCTGCCAATTGGCTGA
Upstream 100 bases:
>100_bases GTATGGACGGACAGCCCAGCAGGCCATTGATTGTGCAAAAGTTACGTGAGCCAGTGTTTTGACAGAAAACGCGGGTCTGC AGTGGAGAAAAGTGTTGCAC
Downstream 100 bases:
>100_bases GCGGCCGGGCAGGCGCTTTGCAGCGGGTCGCGTTACCGGAGGCGACCTTAGCGCATCCAAGGCTGCGACATGCGCCAAAG CACATGCCGCAACCGCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MELESALEGKAYVVQYLQSLTHEMKRPLAVIRSASELLTEPVLETDRQHFVASIRAQEQRLTETIDKLLALAEVEQHGWL QTRERIGLRRLPQAAAEAISLRAAATGVMVDVDASAATSGDHHVLGDGFLLRQALINLLENAIAFSPQDSCVRLHPQLHD EHWELADEDRGSGVPDYAIERVFERFYSLALPQTGQRGSGFGLPFVGEVARLHGGDVTPGNRDGGGAMAMLPLPIG
Sequences:
>Translated_236_residues MELESALEGKAYVVQYLQSLTHEMKRPLAVIRSASELLTEPVLETDRQHFVASIRAQEQRLTETIDKLLALAEVEQHGWL QTRERIGLRRLPQAAAEAISLRAAATGVMVDVDASAATSGDHHVLGDGFLLRQALINLLENAIAFSPQDSCVRLHPQLHD EHWELADEDRGSGVPDYAIERVFERFYSLALPQTGQRGSGFGLPFVGEVARLHGGDVTPGNRDGGGAMAMLPLPIG >Mature_236_residues MELESALEGKAYVVQYLQSLTHEMKRPLAVIRSASELLTEPVLETDRQHFVASIRAQEQRLTETIDKLLALAEVEQHGWL QTRERIGLRRLPQAAAEAISLRAAATGVMVDVDASAATSGDHHVLGDGFLLRQALINLLENAIAFSPQDSCVRLHPQLHD EHWELADEDRGSGVPDYAIERVFERFYSLALPQTGQRGSGFGLPFVGEVARLHGGDVTPGNRDGGGAMAMLPLPIG
Specific function: Member of the two-component regulatory system CreC/CreB involved in catabolic regulation. CreC may function as a membrane- associated protein kinase that phosphorylates CreB in response to environmental signals. CreC can also phosphorylate PhoB [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790861, Length=233, Percent_Identity=41.2017167381974, Blast_Score=147, Evalue=6e-37, Organism=Escherichia coli, GI48994928, Length=225, Percent_Identity=24, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1786912, Length=228, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788393, Length=236, Percent_Identity=25.8474576271186, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=25.1121076233184, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87082128, Length=224, Percent_Identity=26.3392857142857, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1788549, Length=219, Percent_Identity=23.7442922374429, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI145693157, Length=230, Percent_Identity=23.0434782608696, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788713, Length=242, Percent_Identity=23.9669421487603, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 25791; Mature: 25791
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELESALEGKAYVVQYLQSLTHEMKRPLAVIRSASELLTEPVLETDRQHFVASIRAQEQR CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTETIDKLLALAEVEQHGWLQTRERIGLRRLPQAAAEAISLRAAATGVMVDVDASAATSG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC DHHVLGDGFLLRQALINLLENAIAFSPQDSCVRLHPQLHDEHWELADEDRGSGVPDYAIE CCEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCCCCCCCCCCCCCCHHHHH RVFERFYSLALPQTGQRGSGFGLPFVGEVARLHGGDVTPGNRDGGGAMAMLPLPIG HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MELESALEGKAYVVQYLQSLTHEMKRPLAVIRSASELLTEPVLETDRQHFVASIRAQEQR CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTETIDKLLALAEVEQHGWLQTRERIGLRRLPQAAAEAISLRAAATGVMVDVDASAATSG HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCC DHHVLGDGFLLRQALINLLENAIAFSPQDSCVRLHPQLHDEHWELADEDRGSGVPDYAIE CCEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCCCCCCCCCCCCCCCCCHHHHH RVFERFYSLALPQTGQRGSGFGLPFVGEVARLHGGDVTPGNRDGGGAMAMLPLPIG HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3531171; 7610040; 9278503; 2835585; 2228961 [H]