| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623036
Identifier: 84623036
GI number: 84623036
Start: 1507429
End: 1508058
Strand: Direct
Name: 84623036
Synonym: XOO_1379
Alternate gene names: NA
Gene position: 1507429-1508058 (Clockwise)
Preceding gene: 84623035
Following gene: 84623037
Centisome position: 30.51
GC content: 66.19
Gene sequence:
>630_bases ATGATGAAGAGAGACGGACGCTTGGTATCGCGGGCGGCGCTGGAAGAAATGCGCCTGATGGCGTTGCAACGGATGGGCGA AGGCGAATCGCCGGCCAAAGTGGCCGCGTCGTTCGGGTTGCATCGCGGCTGGGCGTACAAAGTGCTGGCGCGAGCACAGG AGGGCGGCGCTGGCGCATTGATGACGCGTAAGGGCAGCGGTCGCCCGCGGACGTTGACGCCGGCGCAGGAGCGCCAGGTG TTCGGCTGGGTCAATGGCAAGACCCCTCGCCAGCATGGCTTCGCCTTCGGTCTGTGGACGCGGCAGGTCGTGCGTGAACT GATCGAGAAGAAATGTGCCGCACGGTTGAGTCTGGCCAGCGTCGGGACGTTGCTGGCGCGGCTGGGGCTGAGCCCACAGA AGCCGCTGCAACACGCCTATCAGCGCGATCCACTGGCGGTAGCGCAGACGTACCCGGCGATCGTGACGCACGCCAAGCGG GAAAAGGCCGAGATTGACTTCTGGGACGAGTCTGGCTTCCGTGCCGATGCGGTGCAAGGACGGACGTGGGCCGTCAAGGG CGTCACGCCGGTTGTCGCGGTGCCGGGGCAGCGCCAGAGCATCAGTGCGGCCTCGGCGGTGAACAGCTAA
Upstream 100 bases:
>100_bases TCCAAGGCTGCGACATGCGCCAAAGCACATGCCGCAACCGCTTTCCTAATAAGTCAGTAAATTAGGGAGCAAATGTCGAC GTCATGCTGTCCAACCATCC
Downstream 100 bases:
>100_bases GGGCGGGTTCTGGTTCGCCGTGTACAGCGGCGGATTGAACGGTGAATTGTTCGTGGACCTGCTCAAGCGAATGATGAAAG GCCGTCGCCGTCCAATCCAT
Product: ISXoo2 transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; ISXoo2 Transposase; Helix-Turn-Helix Type; Transposase IS; Transposase Of IS; Transposase And Inactivated Derivatives-Like Protein; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV FGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKR EKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNS
Sequences:
>Translated_209_residues MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV FGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKR EKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNS >Mature_209_residues MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV FGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKR EKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNS
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22816; Mature: 22816
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGAL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE MTRKGSGRPRTLTPAQERQVFGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLAS EEECCCCCCCCCCCHHHCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKREKAEIDFWDESGFRADAVQG HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC RTWAVKGVTPVVAVPGQRQSISAASAVNS CEEEECCCCEEEECCCCCCHHHHHHHCCC >Mature Secondary Structure MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGAL CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE MTRKGSGRPRTLTPAQERQVFGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLAS EEECCCCCCCCCCCHHHCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKREKAEIDFWDESGFRADAVQG HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC RTWAVKGVTPVVAVPGQRQSISAASAVNS CEEEECCCCEEEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA