Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84623036

Identifier: 84623036

GI number: 84623036

Start: 1507429

End: 1508058

Strand: Direct

Name: 84623036

Synonym: XOO_1379

Alternate gene names: NA

Gene position: 1507429-1508058 (Clockwise)

Preceding gene: 84623035

Following gene: 84623037

Centisome position: 30.51

GC content: 66.19

Gene sequence:

>630_bases
ATGATGAAGAGAGACGGACGCTTGGTATCGCGGGCGGCGCTGGAAGAAATGCGCCTGATGGCGTTGCAACGGATGGGCGA
AGGCGAATCGCCGGCCAAAGTGGCCGCGTCGTTCGGGTTGCATCGCGGCTGGGCGTACAAAGTGCTGGCGCGAGCACAGG
AGGGCGGCGCTGGCGCATTGATGACGCGTAAGGGCAGCGGTCGCCCGCGGACGTTGACGCCGGCGCAGGAGCGCCAGGTG
TTCGGCTGGGTCAATGGCAAGACCCCTCGCCAGCATGGCTTCGCCTTCGGTCTGTGGACGCGGCAGGTCGTGCGTGAACT
GATCGAGAAGAAATGTGCCGCACGGTTGAGTCTGGCCAGCGTCGGGACGTTGCTGGCGCGGCTGGGGCTGAGCCCACAGA
AGCCGCTGCAACACGCCTATCAGCGCGATCCACTGGCGGTAGCGCAGACGTACCCGGCGATCGTGACGCACGCCAAGCGG
GAAAAGGCCGAGATTGACTTCTGGGACGAGTCTGGCTTCCGTGCCGATGCGGTGCAAGGACGGACGTGGGCCGTCAAGGG
CGTCACGCCGGTTGTCGCGGTGCCGGGGCAGCGCCAGAGCATCAGTGCGGCCTCGGCGGTGAACAGCTAA

Upstream 100 bases:

>100_bases
TCCAAGGCTGCGACATGCGCCAAAGCACATGCCGCAACCGCTTTCCTAATAAGTCAGTAAATTAGGGAGCAAATGTCGAC
GTCATGCTGTCCAACCATCC

Downstream 100 bases:

>100_bases
GGGCGGGTTCTGGTTCGCCGTGTACAGCGGCGGATTGAACGGTGAATTGTTCGTGGACCTGCTCAAGCGAATGATGAAAG
GCCGTCGCCGTCCAATCCAT

Product: ISXoo2 transposase

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; ISXoo2 Transposase; Helix-Turn-Helix Type; Transposase IS; Transposase Of IS; Transposase And Inactivated Derivatives-Like Protein; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKR
EKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNS

Sequences:

>Translated_209_residues
MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKR
EKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNS
>Mature_209_residues
MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTLTPAQERQV
FGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKR
EKAEIDFWDESGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNS

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22816; Mature: 22816

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGAL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
MTRKGSGRPRTLTPAQERQVFGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLAS
EEECCCCCCCCCCCHHHCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKREKAEIDFWDESGFRADAVQG
HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
RTWAVKGVTPVVAVPGQRQSISAASAVNS
CEEEECCCCEEEECCCCCCHHHHHHHCCC
>Mature Secondary Structure
MMKRDGRLVSRAALEEMRLMALQRMGEGESPAKVAASFGLHRGWAYKVLARAQEGGAGAL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEE
MTRKGSGRPRTLTPAQERQVFGWVNGKTPRQHGFAFGLWTRQVVRELIEKKCAARLSLAS
EEECCCCCCCCCCCHHHCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLLARLGLSPQKPLQHAYQRDPLAVAQTYPAIVTHAKREKAEIDFWDESGFRADAVQG
HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
RTWAVKGVTPVVAVPGQRQSISAASAVNS
CEEEECCCCEEEECCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA