| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623012
Identifier: 84623012
GI number: 84623012
Start: 1477697
End: 1478284
Strand: Direct
Name: 84623012
Synonym: XOO_1355
Alternate gene names: NA
Gene position: 1477697-1478284 (Clockwise)
Preceding gene: 84623011
Following gene: 84623013
Centisome position: 29.91
GC content: 59.01
Gene sequence:
>588_bases ATGCAATACGAGGACATGATGCAACACCACGATAAAGACCAAACTCATAGCAGAAGCTATCGTGCCGTTGCCCGCCTGCT GGCGGCGCTGACCCTGCTCTCACTGTTGGTCGCCTGCAAGGCCGAGCCGTCCACAACTGCTGAAGCGAGCATCAGTCCGT ACAACCATACCGAGGACTATATTCACCAGCTCTATATCGATGGTCAATGGGGTGGAAACTCGCGCCCGTACGGCGGCGGC GGAAGCTTCGTCTGCTGCGTCACCTATCCACGTCAATGGCACCCTGGCCTGACCGCCAAAGTTCGTTGGACAACATCCAG TGGTATTCCCGGCGGTGACGATCCAACCGAAACCTGGCACGAGAAGGTCGTCCCCATCGAACGCTATGAGAAACCCGGGA CGCGGCTCAATGTGCACTTTCTGCCGGAAGGGAAGGTGCGCCTGTTGATCTGGAACGGCGCGGCCGGATCGAAAGGCTAC AAAGGCCCCGATGCACCGGTCAAACCCGATAACTGGCCGCCGCTACCGCCGCCACCGATATTGCCGGACGCAAAATCCGA ACACGCCGATGCGGAGCATCAGCCATGA
Upstream 100 bases:
>100_bases TGCTGCCGAATGGCCACCAGATCCCGTACTTCCGTCTCACCTATTAGCGGCGTACTCTGGTGCACTGAATGCCTGCAACC AACGCACCACTGCTTCGCCA
Downstream 100 bases:
>100_bases GCGACTTCAAACCTGGATGGTACGCGGTCAAGCGCCTGCACGATGGCGCGGTGGACAACTGGTATTTCGAGACGCGGGAG CGGGTGACGCTGACCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MQYEDMMQHHDKDQTHSRSYRAVARLLAALTLLSLLVACKAEPSTTAEASISPYNHTEDYIHQLYIDGQWGGNSRPYGGG GSFVCCVTYPRQWHPGLTAKVRWTTSSGIPGGDDPTETWHEKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGY KGPDAPVKPDNWPPLPPPPILPDAKSEHADAEHQP
Sequences:
>Translated_195_residues MQYEDMMQHHDKDQTHSRSYRAVARLLAALTLLSLLVACKAEPSTTAEASISPYNHTEDYIHQLYIDGQWGGNSRPYGGG GSFVCCVTYPRQWHPGLTAKVRWTTSSGIPGGDDPTETWHEKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGY KGPDAPVKPDNWPPLPPPPILPDAKSEHADAEHQP >Mature_195_residues MQYEDMMQHHDKDQTHSRSYRAVARLLAALTLLSLLVACKAEPSTTAEASISPYNHTEDYIHQLYIDGQWGGNSRPYGGG GSFVCCVTYPRQWHPGLTAKVRWTTSSGIPGGDDPTETWHEKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGY KGPDAPVKPDNWPPLPPPPILPDAKSEHADAEHQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21628; Mature: 21628
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYEDMMQHHDKDQTHSRSYRAVARLLAALTLLSLLVACKAEPSTTAEASISPYNHTEDY CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHE IHQLYIDGQWGGNSRPYGGGGSFVCCVTYPRQWHPGLTAKVRWTTSSGIPGGDDPTETWH EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHH EKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGYKGPDAPVKPDNWPPLPPPPI HHCCCHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC LPDAKSEHADAEHQP CCCCCCCCCCCCCCC >Mature Secondary Structure MQYEDMMQHHDKDQTHSRSYRAVARLLAALTLLSLLVACKAEPSTTAEASISPYNHTEDY CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHE IHQLYIDGQWGGNSRPYGGGGSFVCCVTYPRQWHPGLTAKVRWTTSSGIPGGDDPTETWH EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHH EKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGYKGPDAPVKPDNWPPLPPPPI HHCCCHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC LPDAKSEHADAEHQP CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA