| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623011
Identifier: 84623011
GI number: 84623011
Start: 1476928
End: 1477494
Strand: Direct
Name: 84623011
Synonym: XOO_1354
Alternate gene names: NA
Gene position: 1476928-1477494 (Clockwise)
Preceding gene: 84623010
Following gene: 84623012
Centisome position: 29.9
GC content: 58.55
Gene sequence:
>567_bases ATGCGACATCACACAAATGACCAAAACAAGATCAGGAACTTGCCCATCGTTGCCCGCCTGCTGATCGCGCTGGCTCTGCT CTCGCTACTGATCGGCTGCAAGGCCGAGCCGTCTACGACGGCCGAAGCGAGCATCAGTCCTTACAACCATACCGAGGACT ACATCCACGAGCTTTATGTCGATGGCCAATGGGGGGGGAATTCCTATCCATATGGCGGTGGTGGGAGCTTCGTCTGCTGC ATCACCTATCCACGTCAATGGCACCCTGGCCTGACCGCCAAAGTTCGTTGGACAACATCCAGTGGCATTCCCGGCATTCG CAGCGAACCGGTCTGGCACGAGAAGGTCGTCCCCATCGAACGCTATGAGAAACCCGGGACGCGGCTCAATGTGCACTTTC TGCCGGAAGGGAAGGTGCGCCTGTTGATCTGGAACGGCGCGGCCGGATCGAAAGGCTACAAAGGCCCCGATGCACCAGTC AAACCCGATAACTGGCCGCCGCTACCGCCGCCACCGATATTGCCGGACGCAAAATCCGAACACACCGATGCGGAGCATCA GCCATGA
Upstream 100 bases:
>100_bases AGATCCCGTACTTCCGTCTCACCTATTAGCGGCGCACTCTGGTGCACTGAATGCCTGCAACCAACGCACCACTGCTTCGC CAATGCAATACGAGGACACG
Downstream 100 bases:
>100_bases GCGACTTCAAACCTGGGTGGTACGCGGTCAAGCGCCTGCACGATGGTGCGGTGGACAACTGGTATTTCGAGACGCGGGAG CGGGTGACGCTGACCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MRHHTNDQNKIRNLPIVARLLIALALLSLLIGCKAEPSTTAEASISPYNHTEDYIHELYVDGQWGGNSYPYGGGGSFVCC ITYPRQWHPGLTAKVRWTTSSGIPGIRSEPVWHEKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGYKGPDAPV KPDNWPPLPPPPILPDAKSEHTDAEHQP
Sequences:
>Translated_188_residues MRHHTNDQNKIRNLPIVARLLIALALLSLLIGCKAEPSTTAEASISPYNHTEDYIHELYVDGQWGGNSYPYGGGGSFVCC ITYPRQWHPGLTAKVRWTTSSGIPGIRSEPVWHEKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGYKGPDAPV KPDNWPPLPPPPILPDAKSEHTDAEHQP >Mature_188_residues MRHHTNDQNKIRNLPIVARLLIALALLSLLIGCKAEPSTTAEASISPYNHTEDYIHELYVDGQWGGNSYPYGGGGSFVCC ITYPRQWHPGLTAKVRWTTSSGIPGIRSEPVWHEKVVPIERYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGYKGPDAPV KPDNWPPLPPPPILPDAKSEHTDAEHQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20837; Mature: 20837
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHHTNDQNKIRNLPIVARLLIALALLSLLIGCKAEPSTTAEASISPYNHTEDYIHELYV CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEEEEE DGQWGGNSYPYGGGGSFVCCITYPRQWHPGLTAKVRWTTSSGIPGIRSEPVWHEKVVPIE CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH RYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGYKGPDAPVKPDNWPPLPPPPILPDAKSE HHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HTDAEHQP CCCCCCCC >Mature Secondary Structure MRHHTNDQNKIRNLPIVARLLIALALLSLLIGCKAEPSTTAEASISPYNHTEDYIHELYV CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHEEEEE DGQWGGNSYPYGGGGSFVCCITYPRQWHPGLTAKVRWTTSSGIPGIRSEPVWHEKVVPIE CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH RYEKPGTRLNVHFLPEGKVRLLIWNGAAGSKGYKGPDAPVKPDNWPPLPPPPILPDAKSE HHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HTDAEHQP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA