| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623008
Identifier: 84623008
GI number: 84623008
Start: 1474456
End: 1475004
Strand: Direct
Name: 84623008
Synonym: XOO_1351
Alternate gene names: NA
Gene position: 1474456-1475004 (Clockwise)
Preceding gene: 84623007
Following gene: 84623009
Centisome position: 29.85
GC content: 59.56
Gene sequence:
>549_bases ATGAAACGCAGCAGCCTAAGCAATCCTGCCTCCTACCAGCATTGGGTCATGTCGCATGTCGGCGAGGAGCAATACCTGAT CGCCCTGCTCGACCCGACCCGCTATGAAGATATCGACACCTGCGTCGCGGCCCTGGGATTTAGCCAGCAGGAATTCGAGG CGCTCCCCAACCTCTATGAAAAATACGCCCTGACGCTCAGGACGCATGGCCCCCGCGTCTTCAGCGCACGCGTGCAGTCC CTTCTGTGGCCTAGCATCTTCGAGCAGGCTTATACCTGCCAGGCCGCAAGCTTCCTCGTTGCCGATGTCCGTGAGGGTCT GCTCGACCACCTGCTGTCGTTGACGCGCCTCAAGCAGCCTGACGGCAGCAACTTGCTGTTCCGGTTTCAAGACGTGACCG TCCTGTCCGCATTGGCACCCGTATTGGACGAGATACAGCGAGCAGCCATGGTCGGACCAGCATCGGGTTGGTTCATGAGC GACGTCTGTGCCACTCCTCATTTGATTGAGCCATCAACCTCGCGCAGGCACGCCCCAGGCTTGAACTGA
Upstream 100 bases:
>100_bases CCGGTCGTTTGTCGCTTGGCCGCAAAGCAACTTGAATGCGCCTTGCATGATGCAGGCTGCGGCGACCAATAGCGCGTTTG TGCGAGTGGACTAACGGACC
Downstream 100 bases:
>100_bases CGAAAGCACAGTTGGCGAGGTTGGGCGATGCATTGGCACCGTTCACCATCATTTATCAGGCCAATGAGACCGATACCTCG TTACTGCAGCACCTTGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKRSSLSNPASYQHWVMSHVGEEQYLIALLDPTRYEDIDTCVAALGFSQQEFEALPNLYEKYALTLRTHGPRVFSARVQS LLWPSIFEQAYTCQAASFLVADVREGLLDHLLSLTRLKQPDGSNLLFRFQDVTVLSALAPVLDEIQRAAMVGPASGWFMS DVCATPHLIEPSTSRRHAPGLN
Sequences:
>Translated_182_residues MKRSSLSNPASYQHWVMSHVGEEQYLIALLDPTRYEDIDTCVAALGFSQQEFEALPNLYEKYALTLRTHGPRVFSARVQS LLWPSIFEQAYTCQAASFLVADVREGLLDHLLSLTRLKQPDGSNLLFRFQDVTVLSALAPVLDEIQRAAMVGPASGWFMS DVCATPHLIEPSTSRRHAPGLN >Mature_182_residues MKRSSLSNPASYQHWVMSHVGEEQYLIALLDPTRYEDIDTCVAALGFSQQEFEALPNLYEKYALTLRTHGPRVFSARVQS LLWPSIFEQAYTCQAASFLVADVREGLLDHLLSLTRLKQPDGSNLLFRFQDVTVLSALAPVLDEIQRAAMVGPASGWFMS DVCATPHLIEPSTSRRHAPGLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20336; Mature: 20336
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSSLSNPASYQHWVMSHVGEEQYLIALLDPTRYEDIDTCVAALGFSQQEFEALPNLYE CCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHH KYALTLRTHGPRVFSARVQSLLWPSIFEQAYTCQAASFLVADVREGLLDHLLSLTRLKQP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DGSNLLFRFQDVTVLSALAPVLDEIQRAAMVGPASGWFMSDVCATPHLIEPSTSRRHAPG CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC LN CC >Mature Secondary Structure MKRSSLSNPASYQHWVMSHVGEEQYLIALLDPTRYEDIDTCVAALGFSQQEFEALPNLYE CCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHH KYALTLRTHGPRVFSARVQSLLWPSIFEQAYTCQAASFLVADVREGLLDHLLSLTRLKQP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DGSNLLFRFQDVTVLSALAPVLDEIQRAAMVGPASGWFMSDVCATPHLIEPSTSRRHAPG CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC LN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA