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The map label for this gene is 84623007

Identifier: 84623007

GI number: 84623007

Start: 1472548

End: 1474449

Strand: Direct

Name: 84623007

Synonym: XOO_1350

Alternate gene names: NA

Gene position: 1472548-1474449 (Clockwise)

Preceding gene: 84623006

Following gene: 84623008

Centisome position: 29.81

GC content: 73.08

Gene sequence:

>1902_bases
TTGCGATCATTTACCGACACACGCACCGCCAGGCGCACGTTGGCCCGCTCCATCGGGCTGCTGACCCAGTCACCGCAGCA
GGGCCAGGCGCCGCCGGCGCAGCTGTTGCTGACGCGGGTGTGGCATGCGGGTATCAACAACTTGCCGGTGGACGTGCGCG
CGGCGGTGCAGTCGCAGTTGGGGGCCGCGCCGGCGTGGCCGGACGCCAGCGCGGTGGCCGCACGCAGCACCTGGGCGCAG
GCCGAGGCGGTGGGCTACGGCAACGCCTTCGAGGCGGTGGACCGGCAGCAGCCGTGGCGGCCGGTGCTGGCCGACGGCAC
CGGGGCGCGGCTGCACCCGCGGCCGACCGCGCCGGGCTCCCAGAGCGCCATCGTGGTCGGTGCCGATGGCAGCACCGACG
GCAGCCAGGAGGTCCATGCCGACGCGCTGGGCCGGATCCGCGTCAGGTTCCACTTCCAGCACGCCGCGTCGGCCCCGGCC
GCGCAGGACAGCACGTGGCTGCGGGTGGCGCAGCGCTACGCCGGCCCGGGCGTGGGCAGCCAGTTCCTGCCACGCATCGG
CCAGGAAGTGCTGGTGGGCTTCCTGGAGGGGGACATCGACCGTCCGGTGGTGCTGGGGGCGCTGTACAACGGCAAGGGCG
AAGCCGGCGTTCCCGCCACCCCCGGCGGCAGCAGCGCCGAGGCCGACACCGGCCTGTACGCCCAGGCCGGCGACGGCAGA
CCCAGCGCGCAGGGCAACCTGGCCGGCGGCCATGCCCCGGCCTGGCACGGTGCCGGCGGCGGCGCGGACAACCACCGCAA
CGCCACCGCGCTGTGGGGCGTGCAATCCAAGGAATGGGGCGGCGCTGGCCACAGCCGGCTGGTGTTCGACGACAGCGACC
AGCAACTGCGCTTGCAGCTGGCCACGACCCAGGCAGCCACGCAGCTGAACCTGGGGCACCTGATCCACCAGGCCGACAAC
TACCGCGGCAGCTTCCGCGGGGAAGGCTTCGAACTGCGCACCGACGCGTGGGGCGCGGTGCGGGCCAGCTCGGGGCTATG
GCTGAGCAGCTACGGCCGCAGCGGCGGCCCGGCCGGCGAGGCGACCCAGCCCAGCGCATTGCTGAGCCAGCTGCAGACGC
TGGGCAAGACGTTCTCGCAGGCGGCGGGCACGCGCCAGACGGTGAAGCTGGCCGCGCAAAAAGGCGTGGGCCAGGCGAAC
CACTCCCAGCTGATCGCCGAGCAGGCGCCGCTGCCGGCGCTGCTGACCAGCGTGAAGACCACGGTGCCGGGCACGGCCTA
CGCCGACGCCAAGGGCGCGGCGGCCGAGCGCCGCGCCAGCCCGGGCGACGACCGGGTGCCGCACACCGGCGATGCGCTGC
TGGGCCTGGCCGCACCAGCGGGGATCGGCGTGGTGGCCGGCCAGGGCCTGAGCTGGAGCGTGGGCGAGACGCTGACACTG
GCCAGCGGCGCGGGCAGCGAAGCGGCCATCGCCGGCGACGCCCGGCTGCACAGCGGCCAGGCAATCGGCGTGCTGGCCGC
GGCGGTGGACGGCGGGCAAACGCAAGCCAACAGCCTGAGCCTCGTCAGCGGCGAAGGCGCGCTGGACGTGCAGGCGCAGT
CGGACGACGTGCGCGTACAGTCGAAAGAAGGGCTGAAGCTGATCAGCGCCAACGCCGACGTGGCCCTGGCGGCGGGCAAG
ACCCTCCACCTGGCGGTGGCCGGCGGGGCCAGCGTGACCATCGAAGGCGGCAACATCACCGTCGCCTGCCCCGGCACCAT
CACCGTGCATGCGAGCAAGAAGTCGTTCGTGGGGCCAACGACGCTGAACCGGTCGTTTGTCGCTTGGCCGCAAAGCAACT
TGAATGCGCCTTGCATGATGCAGGCTGCGGCGACCAATAGCGCGTTTGTGCGAGTGGACTAA

Upstream 100 bases:

>100_bases
CTTATGGGCGATGGGGACGGGCACACGGCGTGAGGCGAACGGGCATGGTCAATATCGCCGGCTATTCGACCGTAGTTGAT
GTAACGCGGCAGATGTTCGC

Downstream 100 bases:

>100_bases
CGGACCATGAAACGCAGCAGCCTAAGCAATCCTGCCTCCTACCAGCATTGGGTCATGTCGCATGTCGGCGAGGAGCAATA
CCTGATCGCCCTGCTCGACC

Product: VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; Vgr-Related Protein; VgrG Protein; Rhs Element Vgr Family; Rhs-Family Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; VGR-Like Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; VgrG Family T6SS G; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Vrg Family Protein; Rhs Family Protein; Rhs/Vgr-Family Protein; Vgr Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MRSFTDTRTARRTLARSIGLLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQ
AEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGSQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPA
AQDSTWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGSSAEADTGLYAQAGDGR
PSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADN
YRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTRQTVKLAAQKGVGQAN
HSQLIAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTL
ASGAGSEAAIAGDARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGK
TLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD

Sequences:

>Translated_633_residues
MRSFTDTRTARRTLARSIGLLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQ
AEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGSQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPA
AQDSTWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGSSAEADTGLYAQAGDGR
PSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADN
YRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTRQTVKLAAQKGVGQAN
HSQLIAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTL
ASGAGSEAAIAGDARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGK
TLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD
>Mature_633_residues
MRSFTDTRTARRTLARSIGLLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQ
AEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGSQSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPA
AQDSTWLRVAQRYAGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGSSAEADTGLYAQAGDGR
PSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADN
YRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTRQTVKLAAQKGVGQAN
HSQLIAEQAPLPALLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTL
ASGAGSEAAIAGDARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGK
TLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPTTLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64600; Mature: 64600

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFTDTRTARRTLARSIGLLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGS
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEECCCCCEECCCCCCCCC
QSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRYAGPGVGS
CCEEEEECCCCCCCCCHHHHHHHCEEEEEEEEEHHCCCCCCCCHHHHHHHHHHCCCCCCH
QFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGSSAEADTGLYAQAGDGR
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
PSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE
ATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGE
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCCCCCCC
ATQPSALLSQLQTLGKTFSQAAGTRQTVKLAAQKGVGQANHSQLIAEQAPLPALLTSVKT
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHH
TVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTL
CCCCCEECCCCCCHHHHCCCCCCCCCCCCCCHHEEECCCCCCEEEECCCCCCCCCCEEEE
ASGAGSEAAIAGDARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQ
ECCCCCCEEEECCCEECCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEE
SKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPT
CCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECCCEEEEEECCCCCCCCC
TLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD
CCCCCEEECCCCCCCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure
MRSFTDTRTARRTLARSIGLLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
GAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHPRPTAPGS
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEECCCCCEECCCCCCCCC
QSAIVVGADGSTDGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRYAGPGVGS
CCEEEEECCCCCCCCCHHHHHHHCEEEEEEEEEHHCCCCCCCCHHHHHHHHHHCCCCCCH
QFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGSSAEADTGLYAQAGDGR
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
PSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGGAGHSRLVFDDSDQQLRLQL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE
ATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGRSGGPAGE
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCCCCCCC
ATQPSALLSQLQTLGKTFSQAAGTRQTVKLAAQKGVGQANHSQLIAEQAPLPALLTSVKT
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHH
TVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTL
CCCCCEECCCCCCHHHHCCCCCCCCCCCCCCHHEEECCCCCCEEEECCCCCCCCCCEEEE
ASGAGSEAAIAGDARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQ
ECCCCCCEEEECCCEECCCCEEEEEEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEE
SKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASKKSFVGPT
CCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECCCEEEEEECCCCCCCCC
TLNRSFVAWPQSNLNAPCMMQAAATNSAFVRVD
CCCCCEEECCCCCCCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA