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The map label for this gene is ysgA [C]

Identifier: 84622978

GI number: 84622978

Start: 1442291

End: 1443085

Strand: Direct

Name: ysgA [C]

Synonym: XOO_1321

Alternate gene names: 84622978

Gene position: 1442291-1443085 (Clockwise)

Preceding gene: 84622977

Following gene: 84622980

Centisome position: 29.19

GC content: 66.04

Gene sequence:

>795_bases
ATGCAATCGATATGGCGTGGCGTTGGGTTGATCGGCCTCCTGGCCTCGCTGGCCTTCCCCGCAGCGGCGGCGATGCAGGC
CAAGCCTCTGGAATGGAAGGTTGGCAAAGACACCTACAGCGGCGTGCTGGTGTACGACGATGCCGGCGATGCCAAGCGTC
CGGGACTGGTGATGGTGCCCAATTGGCGCGGCGTCAATGACTCGGCGGTGAGCAAGGCCAAGCAACTGGCCGGCGACGAG
TACGTGGTGCTGGTGGCCGACGTGTACGGCAAAGGCAAGCGCCCTGCCAACGACAGCGAAGCCGGGCAGTTCGCCGGCGC
GCTGAAGAAGGATCCGCCGGAGTTGCGCGCACGCGCGTTGACAGCAGTCGAGGTGCTCAAGGCGCAGGCTGGCAAGGCAC
CGCTGGACGCAGCGCGCATCGGTGCGGTGGGTTTCTGCTTTGGCGGCACCACGGTGCTGGAGCTGGTGCGTGCAGGCGCG
CAGTTGGCCGGTGTTGTCAGCCTGCATGGCGGCATCGCCACGCCCAGCCCGGCCGCCGCCGGCTCGGCCAAAACGCCGTT
GCTGGTGCTCAACGGTGCCGACGACAAGAGCGTGAGCAAAGCGGATATCGCTGCGTTCGAAACCGAGATGAATGCAGCCG
GCGCGGACTGGCAGTTCGTCAATTTCAGCGGCGCGGTGCATTGCTTTGCCGAGGCCGACGCCAACAGCCCGCCGGGCTGC
CTGTACAACCCGCGTGCGGCCAAGCGGGCGTATCGCATGCTCGGCGATTTCTTCGACGAGCGGTTTGCTAAGTAG

Upstream 100 bases:

>100_bases
CTGACCAACCAATTGCGGCGCAGTTGCCAGAAGTGGCGATGATGACCCCTCCCGCACGGCGACAGCGCCTACACTCGGTG
CACCATCTGGGAGCAAGCAC

Downstream 100 bases:

>100_bases
CCGGGCTTGGGGATTGGGGATTCGCAAGAGGTGGTCCCGTCCTTCAGCGAATCAAACCCCTGAGTTTTTGCTGGGAGTTT
GCGCTGACCAATCATTCGGC

Product: hypothetical protein

Products: oxohex-2-enedioate [C]

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Twin-Arginine Translocation Pathway Signal; Dienelactone Hydrolases; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQSIWRGVGLIGLLASLAFPAAAAMQAKPLEWKVGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVSKAKQLAGDE
YVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALTAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRAGA
QLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGC
LYNPRAAKRAYRMLGDFFDERFAK

Sequences:

>Translated_264_residues
MQSIWRGVGLIGLLASLAFPAAAAMQAKPLEWKVGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVSKAKQLAGDE
YVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALTAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRAGA
QLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGC
LYNPRAAKRAYRMLGDFFDERFAK
>Mature_264_residues
MQSIWRGVGLIGLLASLAFPAAAAMQAKPLEWKVGKDTYSGVLVYDDAGDAKRPGLVMVPNWRGVNDSAVSKAKQLAGDE
YVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARALTAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRAGA
QLAGVVSLHGGIATPSPAAAGSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGC
LYNPRAAKRAYRMLGDFFDERFAK

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17532655, Length=231, Percent_Identity=36.7965367965368, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17532653, Length=236, Percent_Identity=32.6271186440678, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI193204305, Length=215, Percent_Identity=31.6279069767442, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17536419, Length=213, Percent_Identity=29.1079812206573, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17536415, Length=260, Percent_Identity=25, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17534829, Length=155, Percent_Identity=30.9677419354839, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.45 [C]

Molecular weight: Translated: 27439; Mature: 27439

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSIWRGVGLIGLLASLAFPAAAAMQAKPLEWKVGKDTYSGVLVYDDAGDAKRPGLVMVP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEECC
NWRGVNDSAVSKAKQLAGDEYVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARAL
CCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
TAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRAGAQLAGVVSLHGGIATPSPAAA
HHHHHHHHHCCCCCCCHHHHCEEEEECCCHHHHHHHHCCHHHEEHEEECCCCCCCCCCCC
GSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGC
CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCC
LYNPRAAKRAYRMLGDFFDERFAK
CCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSIWRGVGLIGLLASLAFPAAAAMQAKPLEWKVGKDTYSGVLVYDDAGDAKRPGLVMVP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEECC
NWRGVNDSAVSKAKQLAGDEYVVLVADVYGKGKRPANDSEAGQFAGALKKDPPELRARAL
CCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
TAVEVLKAQAGKAPLDAARIGAVGFCFGGTTVLELVRAGAQLAGVVSLHGGIATPSPAAA
HHHHHHHHHCCCCCCCHHHHCEEEEECCCHHHHHHHHCCHHHEEHEEECCCCCCCCCCCC
GSAKTPLLVLNGADDKSVSKADIAAFETEMNAAGADWQFVNFSGAVHCFAEADANSPPGC
CCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCCCCC
LYNPRAAKRAYRMLGDFFDERFAK
CCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]

Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA