| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622976
Identifier: 84622976
GI number: 84622976
Start: 1439232
End: 1440587
Strand: Direct
Name: 84622976
Synonym: XOO_1319
Alternate gene names: NA
Gene position: 1439232-1440587 (Clockwise)
Preceding gene: 84622975
Following gene: 84622977
Centisome position: 29.13
GC content: 64.09
Gene sequence:
>1356_bases ATGAGCGCTTTCGACAAACATCAGATTTCCACCTTCCGTTTCGTGCGTTGTGCACTCGACGCACAGACCGGCGTGGCGAC GCTGGTGTATGCCTTCGATCAAGGCCCGGAGCTGGTCGAGACCGTTGCCGTACCGGGCGCGCCATTCGCGCTGGGCGGCG CGAACGCCACCGCCGTGCAGCAGGCGCTGCAGCTGCTGCATCTGATTGCAGGCGTGAGTTATTTCAAGGCGGCGGTGCCG CCGAACATCGCCATCGATAGCTACAGTATCGATGCCGAAACGGCCGCGTTGGTGCAAAGCGTGTACCTGCACGGCCTGGG CGAATTTGCCTACCGCAATGGCTTGCAGCTGCACGGCAAGATCCGCTTTCCGGTCGCTGCGCAGGCGGCTGCCGCTGCGC CGGCATTGGGGCTGCGCGTGCATGCGCTGGTGGCGATCGGTGGCGGCAAGGATTCGCTGGTGAGCATCGAGGCCCTGCGC CATGCCGGCGTGGACCAGACGGTCAGCTGGATCGGTGGCTCGCAACTGATCCGCGCCTGCGCAGAGCGCACCGGTTTGCC GGTGCTCAACATCGGCCGCGTGCTGGCACCGGAATTATTCGAGCTCAATCGCCAGGGCGCCTGGAACGGGCATATCCCGG TCACCGCGGTGAACTCGGCCATTCTGGTGCTGGCGGCGCTACTCAATGGCGTGGACCAGGTGGTGTTCTCCAACGAACGC TCGGCCAGTTACGGCAGCCAGATTCCCGGCACCGGCGAGGTCAATCACCAGTGGTCCAAGGGCTGGGCATTCGAGCAAGC GTTCGGCGACTACGTGCAGCGGCATGTGGCGGCGGATCTGCGTTATTACTCGCTGCTGCGGCCGCTCTCCGAGTTGGCGG TGGCGCGGCAATTCGCCAAGACCGATCGCTACGACGCGCATTTTTCCAGCTGCAATCGCAACTTCCACATCATGGGCGAG CGTCCGGTGCATCGCTGGTGCGGCGTGTGCCCGAAGTGCCATTTCGTGTTTCTGGCGCTGGCACCGTTCATGCCCAAGAC ACGGCTGGTCAACATCTTCGGGCGCAATCTGCTCGACGATGCGACGCAGGCCGGCGGCTACGATGCGCTGCTGGAGTTCC AGGACCACAAGCCGTTCGAATGCGTGGGCGAAGGTCGCGAATCGCGCACGGCGATGGCAGTGCTGGCCAGCCGCGCCGAG TGGAAGGAAGACGCAGTAGTGAAGCGCTTCATTCGCGACATCCAGCCGCAGCTCGACCCGAATGACCTGCAGGTCGAGCC ACTGATGGCCATCGAAGGCGAGCACCGGATTCCGCCAGCGCTGTGGGAGCGCGTGCGTGCGAATTTCGCAGTTTGA
Upstream 100 bases:
>100_bases GTTGCCTGCCGCTGCTGTGGGCGGCGGTGCCGTTTTCCATGATTGAATATGTCCTGTGCCGACGTTATCTGCGTCGTGTG CGTGTTCCTGCAGGTAGTCC
Downstream 100 bases:
>100_bases AGGCAAGGCGGTTGCGTTGTGGGGCTGGGGACGCGAAGGACGCGGGGCGTATCGTGCGCTGCGCGCGCAGCTGCCCACCC AATCGCTGACGATGTTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSAFDKHQISTFRFVRCALDAQTGVATLVYAFDQGPELVETVAVPGAPFALGGANATAVQQALQLLHLIAGVSYFKAAVP PNIAIDSYSIDAETAALVQSVYLHGLGEFAYRNGLQLHGKIRFPVAAQAAAAAPALGLRVHALVAIGGGKDSLVSIEALR HAGVDQTVSWIGGSQLIRACAERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGVDQVVFSNER SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRHVAADLRYYSLLRPLSELAVARQFAKTDRYDAHFSSCNRNFHIMGE RPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDDATQAGGYDALLEFQDHKPFECVGEGRESRTAMAVLASRAE WKEDAVVKRFIRDIQPQLDPNDLQVEPLMAIEGEHRIPPALWERVRANFAV
Sequences:
>Translated_451_residues MSAFDKHQISTFRFVRCALDAQTGVATLVYAFDQGPELVETVAVPGAPFALGGANATAVQQALQLLHLIAGVSYFKAAVP PNIAIDSYSIDAETAALVQSVYLHGLGEFAYRNGLQLHGKIRFPVAAQAAAAAPALGLRVHALVAIGGGKDSLVSIEALR HAGVDQTVSWIGGSQLIRACAERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGVDQVVFSNER SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRHVAADLRYYSLLRPLSELAVARQFAKTDRYDAHFSSCNRNFHIMGE RPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDDATQAGGYDALLEFQDHKPFECVGEGRESRTAMAVLASRAE WKEDAVVKRFIRDIQPQLDPNDLQVEPLMAIEGEHRIPPALWERVRANFAV >Mature_450_residues SAFDKHQISTFRFVRCALDAQTGVATLVYAFDQGPELVETVAVPGAPFALGGANATAVQQALQLLHLIAGVSYFKAAVPP NIAIDSYSIDAETAALVQSVYLHGLGEFAYRNGLQLHGKIRFPVAAQAAAAAPALGLRVHALVAIGGGKDSLVSIEALRH AGVDQTVSWIGGSQLIRACAERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGVDQVVFSNERS ASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRHVAADLRYYSLLRPLSELAVARQFAKTDRYDAHFSSCNRNFHIMGER PVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDDATQAGGYDALLEFQDHKPFECVGEGRESRTAMAVLASRAEW KEDAVVKRFIRDIQPQLDPNDLQVEPLMAIEGEHRIPPALWERVRANFAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49184; Mature: 49052
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFDKHQISTFRFVRCALDAQTGVATLVYAFDQGPELVETVAVPGAPFALGGANATAVQ CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCEEECCCCHHHHH QALQLLHLIAGVSYFKAAVPPNIAIDSYSIDAETAALVQSVYLHGLGEFAYRNGLQLHGK HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE IRFPVAAQAAAAAPALGLRVHALVAIGGGKDSLVSIEALRHAGVDQTVSWIGGSQLIRAC EECCHHHHHHHHCCHHCEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHH AERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGVDQVVFSNER HHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRHVAADLRYYSLLRPLSELAVARQFAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDRYDAHFSSCNRNFHIMGERPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDD CCCCHHHHHHCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ATQAGGYDALLEFQDHKPFECVGEGRESRTAMAVLASRAEWKEDAVVKRFIRDIQPQLDP HHHCCCCHHEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NDLQVEPLMAIEGEHRIPPALWERVRANFAV CCCEECEEEEECCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure SAFDKHQISTFRFVRCALDAQTGVATLVYAFDQGPELVETVAVPGAPFALGGANATAVQ CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCEEECCCCHHHHH QALQLLHLIAGVSYFKAAVPPNIAIDSYSIDAETAALVQSVYLHGLGEFAYRNGLQLHGK HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE IRFPVAAQAAAAAPALGLRVHALVAIGGGKDSLVSIEALRHAGVDQTVSWIGGSQLIRAC EECCHHHHHHHHCCHHCEEEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHH AERTGLPVLNIGRVLAPELFELNRQGAWNGHIPVTAVNSAILVLAALLNGVDQVVFSNER HHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SASYGSQIPGTGEVNHQWSKGWAFEQAFGDYVQRHVAADLRYYSLLRPLSELAVARQFAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDRYDAHFSSCNRNFHIMGERPVHRWCGVCPKCHFVFLALAPFMPKTRLVNIFGRNLLDD CCCCHHHHHHCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ATQAGGYDALLEFQDHKPFECVGEGRESRTAMAVLASRAEWKEDAVVKRFIRDIQPQLDP HHHCCCCHHEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NDLQVEPLMAIEGEHRIPPALWERVRANFAV CCCEECEEEEECCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA