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The map label for this gene is yqgE [C]

Identifier: 84622966

GI number: 84622966

Start: 1430299

End: 1430865

Strand: Direct

Name: yqgE [C]

Synonym: XOO_1309

Alternate gene names: 84622966

Gene position: 1430299-1430865 (Clockwise)

Preceding gene: 84622964

Following gene: 84622967

Centisome position: 28.95

GC content: 63.49

Gene sequence:

>567_bases
ATGTCTGTTTTGCCCACGCCTCTGGCCAACCAACTGCTGATTGCGCTTCCGGCGCTGTCCGATCCCACCTTTTCGCGCAG
CGTCGCGCTGATTTGTCAGCACGACGAGAACGGCGCCATGGGCGTGCTGGTCAACCGACCCTCCGAATACACCTTGGGCG
AAGTGCTGTCGCAGATGGGCATCGACACCGACGACGAGCCGTTGCGCGAGCAGATCGTGCTCAGCGGCGGGCCGGTGCAT
CCGGAGCGTGGCTTTGTCATCCATGACGATGCGCGCGAATGGGATTCCAGCCTGGAAGTGGGGCAGGGCGTGTTCCTGAC
CACCTCGCGCGACATTCTTGAGGCCATGGCGGCCGGCAACGGTCCGCGCAATGTGCTGGTAGCGCTGGGTTGCGCTGGTT
GGGGCGCAGGCCAGTTGGAATTCGAACTGGGCGAAAACAGCTGGCTCACCGCGCCCTCCGATGCTAATGTGCTATTCGCC
ACCGCGCTGGAAGATCGCTGGCAGACCGCTGCCGGGCGTATCGGTGTCGACCTGTTCCGGCTCACGGATTATTCCGGGCA
TGCCTGA

Upstream 100 bases:

>100_bases
ACGTGGTTCCTGATGTCGGCGGCATCGTCGTTCCATGGCGTGACACGTCACGTATGGGATTGTTTCTGCGCGCGGCAGAG
CGAACGGCTAGAATGCGGCC

Downstream 100 bases:

>100_bases
GGCGGGCGCGATCCTCCCCGATGGCACCGTGCTGGGCTTCGACGTGGGGTCGCGCCGCATTGGTGTCGCTGTCGGCACCG
CACTCGGCGCTGGCGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTDDEPLREQIVLSGGPVH
PERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGNGPRNVLVALGCAGWGAGQLEFELGENSWLTAPSDANVLFA
TALEDRWQTAAGRIGVDLFRLTDYSGHA

Sequences:

>Translated_188_residues
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTDDEPLREQIVLSGGPVH
PERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGNGPRNVLVALGCAGWGAGQLEFELGENSWLTAPSDANVLFA
TALEDRWQTAAGRIGVDLFRLTDYSGHA
>Mature_187_residues
SVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTDDEPLREQIVLSGGPVHP
ERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGNGPRNVLVALGCAGWGAGQLEFELGENSWLTAPSDANVLFAT
ALEDRWQTAAGRIGVDLFRLTDYSGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=185, Percent_Identity=45.945945945946, Blast_Score=171, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1309_XANOM (Q2P5W3)

Other databases:

- EMBL:   AP008229
- RefSeq:   YP_450338.1
- HSSP:   Q8EBZ9
- ProteinModelPortal:   Q2P5W3
- SMR:   Q2P5W3
- STRING:   Q2P5W3
- GeneID:   3858476
- GenomeReviews:   AP008229_GR
- KEGG:   xom:XOO_1309
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- PhylomeDB:   Q2P5W3
- ProtClustDB:   PRK00228
- BioCyc:   XORY342109:XOO1309-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20129; Mature: 19998

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMG
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHC
IDTDDEPLREQIVLSGGPVHPERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGN
CCCCCCHHHHEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEECHHHHHHHHCCC
GPRNVLVALGCAGWGAGQLEFELGENSWLTAPSDANVLFATALEDRWQTAAGRIGVDLFR
CCCEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEE
LTDYSGHA
EECCCCCC
>Mature Secondary Structure 
SVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMG
CCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHC
IDTDDEPLREQIVLSGGPVHPERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGN
CCCCCCHHHHEEEECCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEECHHHHHHHHCCC
GPRNVLVALGCAGWGAGQLEFELGENSWLTAPSDANVLFATALEDRWQTAAGRIGVDLFR
CCCEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEHHHHHHHHCCCCCEEEEE
LTDYSGHA
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA