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The map label for this gene is yqgF [C]

Identifier: 84622967

GI number: 84622967

Start: 1430858

End: 1431325

Strand: Direct

Name: yqgF [C]

Synonym: XOO_1310

Alternate gene names: 84622967

Gene position: 1430858-1431325 (Clockwise)

Preceding gene: 84622966

Following gene: 84622968

Centisome position: 28.96

GC content: 70.51

Gene sequence:

>468_bases
ATGCCTGAGGCGGGCGCGATCCTCCCCGATGGCACCGTGCTGGGCTTCGACGTGGGGTCGCGCCGCATTGGTGTCGCTGT
CGGCACCGCACTCGGCGCTGGCGCGCGTGCAGTGGCCGTCATCAATGTGCATGCCAGCGGCCCCGACTGGGACGCGCTAG
ACCGCGTGCACAAGGAATGGCGCCCCGACGGCCTGGTGGTCGGCGACCCGCTGACGCTGGACGACAAACACCAGCCCGCA
CGCAAGCGCGCGCATGCGTTCGCCCGCCAGCTGCGCGAGCGCTATGCGCTGCCGGTCGTATTGATCGATGAGCGCTCCAG
CTCGGTTGAGGCCGCGCAGCGTTTCGCGCGCGAGCGCGCCGATGGGCGCAAGCGCCGCCGCGATGCCGAAGCGCTCGATG
CCATGGCCGCTGCGGTGATCGTCGAACGCTGGTTGGCCGCGCCCGACCAAGCCACCCTTCTTCCTTGA

Upstream 100 bases:

>100_bases
GATGCTAATGTGCTATTCGCCACCGCGCTGGAAGATCGCTGGCAGACCGCTGCCGGGCGTATCGGTGTCGACCTGTTCCG
GCTCACGGATTATTCCGGGC

Downstream 100 bases:

>100_bases
CTCCCGACCTGCGATGACCACCATGCAACTCGATTCGGACGGACGCCTGCGCCACCTTCTCACCCTGGAAGGAGTGCCGC
GTACCACGCTGCTGCAATTG

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPEAGAILPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHASGPDWDALDRVHKEWRPDGLVVGDPLTLDDKHQPA
RKRAHAFARQLRERYALPVVLIDERSSSVEAAQRFARERADGRKRRRDAEALDAMAAAVIVERWLAAPDQATLLP

Sequences:

>Translated_155_residues
MPEAGAILPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHASGPDWDALDRVHKEWRPDGLVVGDPLTLDDKHQPA
RKRAHAFARQLRERYALPVVLIDERSSSVEAAQRFARERADGRKRRRDAEALDAMAAAVIVERWLAAPDQATLLP
>Mature_154_residues
PEAGAILPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHASGPDWDALDRVHKEWRPDGLVVGDPLTLDDKHQPAR
KRAHAFARQLRERYALPVVLIDERSSSVEAAQRFARERADGRKRRRDAEALDAMAAAVIVERWLAAPDQATLLP

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=135, Percent_Identity=37.7777777777778, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 16769; Mature: 16638

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEAGAILPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHASGPDWDALDRVHKEW
CCCCCCCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHC
RPDGLVVGDPLTLDDKHQPARKRAHAFARQLRERYALPVVLIDERSSSVEAAQRFARERA
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
DGRKRRRDAEALDAMAAAVIVERWLAAPDQATLLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PEAGAILPDGTVLGFDVGSRRIGVAVGTALGAGARAVAVINVHASGPDWDALDRVHKEW
CCCCCCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHC
RPDGLVVGDPLTLDDKHQPARKRAHAFARQLRERYALPVVLIDERSSSVEAAQRFARERA
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHH
DGRKRRRDAEALDAMAAAVIVERWLAAPDQATLLP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]