| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622862
Identifier: 84622862
GI number: 84622862
Start: 1310532
End: 1311383
Strand: Direct
Name: 84622862
Synonym: XOO_1205
Alternate gene names: NA
Gene position: 1310532-1311383 (Clockwise)
Preceding gene: 84622858
Following gene: 84622864
Centisome position: 26.53
GC content: 62.91
Gene sequence:
>852_bases ATGGAACGCAAGGGCAGCGGTCGCCCGCGGACGTTGACGCCGGCGCAGGAGCGCCAGGTGTTGGGCTGGGTCAATGGCAA GAACCCTGGCCAGCATGGCTTCGCCTTCGGTCTGTGGACGCGGCAGGTAGTGCGTGAACTGATCCAGAAGAAATGTGCCG CAAGGTTGAGTCTGGCCAGCGTCGGGACGTTGCTGGCGCGGCTGGGGCTGAGCCCACAGAAGCCGCTGCAACACGCCTAT CAGCGCGATCCACTGGCGGTAACGCATTGGGAAAAGCAGACTTACCCGGCGATCGTGAAGCACGCCAAGCGGGAAAAGGC CGAGATTGACTTCTGGGACGCGTCTGGCTTCCGTGCCGATGCGGTGCAAGGACGGACGTGGGCCGTCAAGGGCGTCACGC CGGTTGTCGCGGTGCCGGGGCAGCGCCAGAGCATCAGTGCGGCCTCGGCGGTGAACAGCAAGGGCGGGTTCTGGTTCGCC GTGTACAGCGGCGGCTTGAACGGTGAATTGTTCGTGGCCCTGCTCAAGCTGATGATGAAGGGCCGTCGCCGTCCAATCCA TCTGGTGCTCGATGGTTTGCCTGCTCACAAGACCCGTGGCGTGCGCGATGACGTGGACAGCCTGAAGGGCAGGTTGACGC TGCATTTCCTGCCGGGTGACGCGCAGGACTTGAATCCCGACGAGTTGGTGTGGAGCTACACCAAGCGCACGGGCGTAGCG CGCCGCCCGCTGCGCAGTGGCGAGAAGCTGGCCGATCGGGTGCATGATCAGTTGTCCGACATTGCAGCTCGACCAGAATT GGTGCGCTCGTTCTTCAGGCATCCAAGTGTCGCCTATATTTCTGACTTATGA
Upstream 100 bases:
>100_bases AAGGCGAATCGCCAGCCGAAGTGGCCTCGTCGTTCGGGCTGCATCGCGGCTGGGCGTACAAGGTGCTGGCCGAGCACAGG CGGGAGGCGCTGGGGCTTTG
Downstream 100 bases:
>100_bases GTAATGCAAGACACCTCTTCGGGAAACCGTTGTCCGTGAGGTGCATGCAAAAAAACACCAGTGCTGAGCCGGGTCAATCA CCACCAGGCGCGCTTCCGAA
Product: ISXoo2 transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; Helix-Turn-Helix Type; ISXoo2 Transposase; Transposase IS; Transposase Of IS; Transposase And Inactivated Derivatives-Like Protein; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase Fragmentary Gene
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MERKGSGRPRTLTPAQERQVLGWVNGKNPGQHGFAFGLWTRQVVRELIQKKCAARLSLASVGTLLARLGLSPQKPLQHAY QRDPLAVTHWEKQTYPAIVKHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFA VYSGGLNGELFVALLKLMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVA RRPLRSGEKLADRVHDQLSDIAARPELVRSFFRHPSVAYISDL
Sequences:
>Translated_283_residues MERKGSGRPRTLTPAQERQVLGWVNGKNPGQHGFAFGLWTRQVVRELIQKKCAARLSLASVGTLLARLGLSPQKPLQHAY QRDPLAVTHWEKQTYPAIVKHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFA VYSGGLNGELFVALLKLMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVA RRPLRSGEKLADRVHDQLSDIAARPELVRSFFRHPSVAYISDL >Mature_283_residues MERKGSGRPRTLTPAQERQVLGWVNGKNPGQHGFAFGLWTRQVVRELIQKKCAARLSLASVGTLLARLGLSPQKPLQHAY QRDPLAVTHWEKQTYPAIVKHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFA VYSGGLNGELFVALLKLMMKGRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVA RRPLRSGEKLADRVHDQLSDIAARPELVRSFFRHPSVAYISDL
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31462; Mature: 31462
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKGSGRPRTLTPAQERQVLGWVNGKNPGQHGFAFGLWTRQVVRELIQKKCAARLSLAS CCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGTLLARLGLSPQKPLQHAYQRDPLAVTHWEKQTYPAIVKHAKREKAEIDFWDASGFRAD HHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC AVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFVALLKLMMK CCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH GRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVA CCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH RRPLRSGEKLADRVHDQLSDIAARPELVRSFFRHPSVAYISDL HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCC >Mature Secondary Structure MERKGSGRPRTLTPAQERQVLGWVNGKNPGQHGFAFGLWTRQVVRELIQKKCAARLSLAS CCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGTLLARLGLSPQKPLQHAYQRDPLAVTHWEKQTYPAIVKHAKREKAEIDFWDASGFRAD HHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCC AVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFVALLKLMMK CCCCCEEEECCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH GRRRPIHLVLDGLPAHKTRGVRDDVDSLKGRLTLHFLPGDAQDLNPDELVWSYTKRTGVA CCCCCEEEEEECCCCHHCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCH RRPLRSGEKLADRVHDQLSDIAARPELVRSFFRHPSVAYISDL HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA