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The map label for this gene is IS1086 [H]

Identifier: 84622796

GI number: 84622796

Start: 1246506

End: 1246907

Strand: Direct

Name: IS1086 [H]

Synonym: XOO_1139

Alternate gene names: 84622796

Gene position: 1246506-1246907 (Clockwise)

Preceding gene: 84622786

Following gene: 84622797

Centisome position: 25.23

GC content: 60.7

Gene sequence:

>402_bases
GTGGAAGCGCTTCGTCAGCACAAGCCGACGCGCGGCTTGCGCCGTACGACCGCTGCCAAGCGCACGTGGGTGCCGGAGGA
GCTGCGTATCGTCCATCGACCTGAAGAGGTGACGCAGCGCTTGATTCCTGGGCACTGGGAAGGCGACCTGATCAAAGGGG
CTTTCAACCGCTCGTGCGTAGGCACGCTGGTGGAGCGAAAGACGCGCTTTGTGGTGCTGTGCAAGATGGATGGCTGTACT
GCAGAGAATGCGCTGGAGGGCTTCACGCGACAGATGAAGAAGCTGCCGCATTGCCTGCTGGGAAGCCTCACCTATGACCG
TGGAACCGAGATGACGTGTTATCCAGAGCTGATGAAGCGGCTCAACATCGACCTGTGGTTCGCCGATCCACATGCGCCCT
GA

Upstream 100 bases:

>100_bases
ATGGCAGTACACAACTTCGGGTGATCCTGGCAACCCTCGACGACCAGGGTGAGGCTCAGACATCTACGCGCATCCGCGTG
GTGGTTTGAAGAAGTAGCTC

Downstream 100 bases:

>100_bases
CAGCGCGGCAGCAATGAGAACACCAACGGCCTGCTGTGCCAGTTCATGCCCAAAGGCGTGGACTTGTCCAAGGCCAGCCA
GGAGTATCTCAACAGCGTCG

Product: ISXoo15 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVTQRLIPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCKMDGCT
AENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFADPHAP

Sequences:

>Translated_133_residues
MEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVTQRLIPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCKMDGCT
AENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFADPHAP
>Mature_133_residues
MEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVTQRLIPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCKMDGCT
AENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKRLNIDLWFADPHAP

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=104, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1790736, Length=104, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1787671, Length=104, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 15374; Mature: 15374

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVTQRLIPGHWEGDLIKGAFNRSCV
CCCHHCCCCCCHHHHHHHHHHCCCHHHHHEEECCHHHHHHHCCCCCCCCHHHHHCCHHHH
GTLVERKTRFVVLCKMDGCTAENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKR
HHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH
LNIDLWFADPHAP
CCCEEEECCCCCC
>Mature Secondary Structure
MEALRQHKPTRGLRRTTAAKRTWVPEELRIVHRPEEVTQRLIPGHWEGDLIKGAFNRSCV
CCCHHCCCCCCHHHHHHHHHHCCCHHHHHEEECCHHHHHHHCCCCCCCCHHHHHCCHHHH
GTLVERKTRFVVLCKMDGCTAENALEGFTRQMKKLPHCLLGSLTYDRGTEMTCYPELMKR
HHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH
LNIDLWFADPHAP
CCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]