| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622797
Identifier: 84622797
GI number: 84622797
Start: 1247030
End: 1247452
Strand: Direct
Name: 84622797
Synonym: XOO_1140
Alternate gene names: NA
Gene position: 1247030-1247452 (Clockwise)
Preceding gene: 84622796
Following gene: 84622802
Centisome position: 25.24
GC content: 59.81
Gene sequence:
>423_bases ATGGCAGACGCTTGGCTGGAAGACCCCAAACCAGGCGCTGGAAGAAGAGATCGCTCAATTCAACTCACGTGTTGCACTTG CAAGTTGAGACCGCCCTGCCTGATTTCCGCCGTCGGCTTCACCAACGCCACCACGCCATTCAAGCGCGTGTTGCTCTTCC CCTTTATCGGCACCTTCACCGTGGTGCGCTGGCTGGTGTTCAAGAGCTGCAAGCAACCGGTCTTCCCGCAGGAAGTGGAA GCCGAGTGCACGGTCGAACCGAACGATCCGAACATCTGGCCGGTCCCCAAGTCGATCGGCGAGTTCGTGACCACCGTTCC TGGCTTGATGACCTATGCGATGCGCAAGGCACAAGGCATCAGAACGCCGCCGGACGCGCCAACGGATCTGGCGTCGCAGT TCAAGGGCTGGGGCAAGAAGTGA
Upstream 100 bases:
>100_bases CCAACGGCCTGCTGTGCCAGTTCATGCCCAAAGGCGTGGACTTGTCCAAGGCCAGCCAGGAGTATCTCAACAGCGTCGCC GACCTGATGAACGCCCGGCC
Downstream 100 bases:
>100_bases CATGGCGCGCGGTGCGGCCTAACCCGAATCCTGGGTGACACGGGCATTGAACCTGAATTACGCGCCATTCATCCAGGCGA CGTGGAACGATGCGGCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MADAWLEDPKPGAGRRDRSIQLTCCTCKLRPPCLISAVGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPQEVE AECTVEPNDPNIWPVPKSIGEFVTTVPGLMTYAMRKAQGIRTPPDAPTDLASQFKGWGKK
Sequences:
>Translated_140_residues MADAWLEDPKPGAGRRDRSIQLTCCTCKLRPPCLISAVGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPQEVE AECTVEPNDPNIWPVPKSIGEFVTTVPGLMTYAMRKAQGIRTPPDAPTDLASQFKGWGKK >Mature_139_residues ADAWLEDPKPGAGRRDRSIQLTCCTCKLRPPCLISAVGFTNATTPFKRVLLFPFIGTFTVVRWLVFKSCKQPVFPQEVEA ECTVEPNDPNIWPVPKSIGEFVTTVPGLMTYAMRKAQGIRTPPDAPTDLASQFKGWGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15558; Mature: 15427
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAWLEDPKPGAGRRDRSIQLTCCTCKLRPPCLISAVGFTNATTPFKRVLLFPFIGTFT CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH VVRWLVFKSCKQPVFPQEVEAECTVEPNDPNIWPVPKSIGEFVTTVPGLMTYAMRKAQGI HHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC RTPPDAPTDLASQFKGWGKK CCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure ADAWLEDPKPGAGRRDRSIQLTCCTCKLRPPCLISAVGFTNATTPFKRVLLFPFIGTFT CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH VVRWLVFKSCKQPVFPQEVEAECTVEPNDPNIWPVPKSIGEFVTTVPGLMTYAMRKAQGI HHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC RTPPDAPTDLASQFKGWGKK CCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA