| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622744
Identifier: 84622744
GI number: 84622744
Start: 1186756
End: 1187340
Strand: Direct
Name: 84622744
Synonym: XOO_1087
Alternate gene names: NA
Gene position: 1186756-1187340 (Clockwise)
Preceding gene: 84622743
Following gene: 84622750
Centisome position: 24.02
GC content: 67.52
Gene sequence:
>585_bases ATGAACTACCGTCTGGTTTGCAGCATCGCACTGGCGCTGGCCGTGAGCAGTTGCGCTACGCGCCAGGTCGCGGAGCAGGA ACGTCGCCAACGCGAGGATTCGGTGGACCAACGCATGCTGCCCCCGCAGCAGGGCGGCGGTGGCAATGCCGGCGTCGCGT CTTACACGCTGGCGCCAACGCAGCGCTTTCGCATGCCACGTGCGCTGCACAGCGAGGCGCCGGTGCTGCCTGCAGATTCG CCGCGCCAGACCTTGGCGCCCACCACCGTCTGCGCACATCTGATCCTCAGTGCCGACGGTAGCGTGCAGCGCGTGGACCC GATGTCCGACCGCGACGAATGCGCCGCCGGGCTGCTGCCGGACAACGCCGATCTGATGCAGTCAGTGCGAACCACCGCGC AGCGTTGGCAGTTCGTGCCGGCCGCGATGTGCACATATGCGCCAGACGTTGCGCAACCGGCAGCGCCGGACGATTGCACC GGTGCGACTCACGTCGAGCCGGTGCCGGTGACGCTCTCGTTCGCGTTTACCTTCGAGGTGCGGCAAGGCAAGGTGAGCGT GCGCACCGGGAAGGTCGCACGATAG
Upstream 100 bases:
>100_bases ACACCGATACCGACGCTGCCCGAACGCCGCACACGGTCGCACGGTCCGAGCGCGTTGCCAGCTGCACCCAAGCCGAATGC GCGAGACGCGGAGCGCTGCA
Downstream 100 bases:
>100_bases CCATTGCAGCCGCTGCGCAGCGTGCCGGGAAGTGGTGATTGAAGGTGGCGACTTGATGCCAGGCGATTCAAACCGGCCGG TTCAAGCCAACCGGTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNYRLVCSIALALAVSSCATRQVAEQERRQREDSVDQRMLPPQQGGGGNAGVASYTLAPTQRFRMPRALHSEAPVLPADS PRQTLAPTTVCAHLILSADGSVQRVDPMSDRDECAAGLLPDNADLMQSVRTTAQRWQFVPAAMCTYAPDVAQPAAPDDCT GATHVEPVPVTLSFAFTFEVRQGKVSVRTGKVAR
Sequences:
>Translated_194_residues MNYRLVCSIALALAVSSCATRQVAEQERRQREDSVDQRMLPPQQGGGGNAGVASYTLAPTQRFRMPRALHSEAPVLPADS PRQTLAPTTVCAHLILSADGSVQRVDPMSDRDECAAGLLPDNADLMQSVRTTAQRWQFVPAAMCTYAPDVAQPAAPDDCT GATHVEPVPVTLSFAFTFEVRQGKVSVRTGKVAR >Mature_194_residues MNYRLVCSIALALAVSSCATRQVAEQERRQREDSVDQRMLPPQQGGGGNAGVASYTLAPTQRFRMPRALHSEAPVLPADS PRQTLAPTTVCAHLILSADGSVQRVDPMSDRDECAAGLLPDNADLMQSVRTTAQRWQFVPAAMCTYAPDVAQPAAPDDCT GATHVEPVPVTLSFAFTFEVRQGKVSVRTGKVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20865; Mature: 20865
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRLVCSIALALAVSSCATRQVAEQERRQREDSVDQRMLPPQQGGGGNAGVASYTLAPT CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCH QRFRMPRALHSEAPVLPADSPRQTLAPTTVCAHLILSADGSVQRVDPMSDRDECAAGLLP HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHCCCC DNADLMQSVRTTAQRWQFVPAAMCTYAPDVAQPAAPDDCTGATHVEPVPVTLSFAFTFEV CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE RQGKVSVRTGKVAR ECCEEEECCCCCCC >Mature Secondary Structure MNYRLVCSIALALAVSSCATRQVAEQERRQREDSVDQRMLPPQQGGGGNAGVASYTLAPT CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCH QRFRMPRALHSEAPVLPADSPRQTLAPTTVCAHLILSADGSVQRVDPMSDRDECAAGLLP HHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHCCCC DNADLMQSVRTTAQRWQFVPAAMCTYAPDVAQPAAPDDCTGATHVEPVPVTLSFAFTFEV CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE RQGKVSVRTGKVAR ECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA