| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622750
Identifier: 84622750
GI number: 84622750
Start: 1191813
End: 1192763
Strand: Direct
Name: 84622750
Synonym: XOO_1093
Alternate gene names: NA
Gene position: 1191813-1192763 (Clockwise)
Preceding gene: 84622744
Following gene: 84622754
Centisome position: 24.12
GC content: 64.14
Gene sequence:
>951_bases GTGTTGAATAGGTCACTGGAAGTGCGTTTTGAACAGTACGGGGAAGTAGTTGCTGCCGCCCTGTCCCATGCGGATCGCAA ACAGCCCGCACACTGGTACCTGAAAGGGTTGCTACTGCCTGGAGGGCGCAAGAGCGTGGAGCCCATGGCCGCGCGGGTGC ACCCGCAGAACGTGCGCTCAGCCCATCAATCGATGCACCATCTGGTGGCCGATGCCGACTGGAGCGATCAAGCGCTGCTG TCGGCGGTGGCGGCACAGGTGCTGCCGCCCCTGAGCAGGAAGAGCGCAGCGTGTCACTGGATCGTGGACGACACGGGATT TTCAAAGAAGGGGGTGCATTCGGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTG CCGTGAGTTTGTCGATCGCCAACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAG GACACTGTGCGGCGCAAGAAGGCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCCATGGATCAGAT CGACAGCGCGCTGGCGACAGGGATTGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCGAGACCCACTGGCGAG ACCAGCTCAGCGAACGCGGCCTGCTGTACATGGTTGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCT GCGCCCATGCCGCCAGCCAGCCCTAAGGGCGGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTC GGTACATGAAGTCGCGCAGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGACGCAACGCTCA GTTCGCGGTTCGCGGCGGTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGGGCTGCTGA
Upstream 100 bases:
>100_bases GAGCGCAGTCGTTGTGTTAGCCGCTCTTAGTTGCACTATGTTACAAATAATCGTATCTTTGTGCCACTATTGGAAGACCT TCAGGCCGCGTGGGAGAGCT
Downstream 100 bases:
>100_bases TCGAGTGGCCGCCGGGAGAGTCCGAGCCCCGCCACTACTGGTTCTCGACGCTACCAAAGCAAACGCCGGTCAAGACACTA GGTTGCCACGGCACAAGGCC
Product: ISXo8 transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALL SAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQGC
Sequences:
>Translated_316_residues MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALL SAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQGC >Mature_316_residues MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALL SAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQGC
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34673; Mature: 34673
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCHHHHHH AHQSMHHLVADADWSDQALLSAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQ HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH YCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKT HHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH ALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCC APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHE RVRAAHNRQAHDEQGC EEEHHHCCCCCCCCCC >Mature Secondary Structure MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCHHHHHH AHQSMHHLVADADWSDQALLSAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQ HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH YCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKT HHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH ALAMDQIDSALATGIAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCC APMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHE RVRAAHNRQAHDEQGC EEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]