| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84622736
Identifier: 84622736
GI number: 84622736
Start: 1180731
End: 1181405
Strand: Direct
Name: 84622736
Synonym: XOO_1079
Alternate gene names: NA
Gene position: 1180731-1181405 (Clockwise)
Preceding gene: 84622735
Following gene: 84622737
Centisome position: 23.9
GC content: 64.3
Gene sequence:
>675_bases ATGACGTTTTATGCATCTTTGCTGGCGCAGACCCAGGCCGAACGCGAGCGCATGACCCAGGTGCCGATCATCCAGGCGGC ACTGGCCGGCAACATCGCGCGGGCCGACTACGTTGCGTTTCTTGGCCAGGCCTATCATCACGTGCGGCATACCGTGCCGC TGCTGATGGCTTGCGGTGCACGCCTGCCGGCGCGGCTGGAATGGCTGCGCGCAGCCATCGGCGAATACATCGAGGAGGAG ATGGGGCACCAGGAGTGGATCCTGGACGATCTGGTGGCATGCGGGCAGGCGCGCGAAGCGACCGTGCTCGCCGGCCCGTC GCTGGCCACCGAGTTGTTGGTCAGCTACGCCTACGACACCATCCAGCGGGGCAACCCGGTCGGCTTCTTCGGCATGGTGC TGGTGCTGGAAGGCACCAGCGTGGCGTTGGCCACACGTGCGGCCAACAGCATTGCGCAGTCGCTGGAATTGCCGCGCAAT GCGTTCAGTTACTTGTTGTCGCATGGCGATCTGGATATCGAGCATGCCGGCTTTTTCGAGAAGCTGATGAACCGGCTCGA TGACCCACTCGACCAGCAGGCGGTGGTGCATGCGGCCACGCGTTTCTACGTGCTGTACGGCGATCTGTTTCGCACCCTGC GCAGCGATGGCGTGCGGCTGGCGGAGGCCGCGTAA
Upstream 100 bases:
>100_bases ACGGGCGCCCCCGCCGCGACGCGATCCTCGCGCGCTATCAATCCGCCGTCGACCGCAGCTATCGGTTGCCGGCCACCGTC GTCTCTCAAGGAATTTCTCC
Downstream 100 bases:
>100_bases TGGATCTCCACGGCAAGTGCATCATCCTGACCGGCGCCACGGGTGGCATCGGCAGCGCACTCTGTGCGGGCCTGGTCGAG GCAGGCGCAACCGTCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Activator TenA Family; Carbamoylphosphate Synthase Large Subunit; Heme Oxygenase Family; TenA Family Transcriptional Activator; Heme Oxygenase ; Heme Oxygenase Family Protein; AMP-Dependent Synthetase And Ligase; TenA Family Transcription Regulator; Long-Chain-Fatty-Acid-CoA Ligase
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTFYASLLAQTQAERERMTQVPIIQAALAGNIARADYVAFLGQAYHHVRHTVPLLMACGARLPARLEWLRAAIGEYIEEE MGHQEWILDDLVACGQAREATVLAGPSLATELLVSYAYDTIQRGNPVGFFGMVLVLEGTSVALATRAANSIAQSLELPRN AFSYLLSHGDLDIEHAGFFEKLMNRLDDPLDQQAVVHAATRFYVLYGDLFRTLRSDGVRLAEAA
Sequences:
>Translated_224_residues MTFYASLLAQTQAERERMTQVPIIQAALAGNIARADYVAFLGQAYHHVRHTVPLLMACGARLPARLEWLRAAIGEYIEEE MGHQEWILDDLVACGQAREATVLAGPSLATELLVSYAYDTIQRGNPVGFFGMVLVLEGTSVALATRAANSIAQSLELPRN AFSYLLSHGDLDIEHAGFFEKLMNRLDDPLDQQAVVHAATRFYVLYGDLFRTLRSDGVRLAEAA >Mature_223_residues TFYASLLAQTQAERERMTQVPIIQAALAGNIARADYVAFLGQAYHHVRHTVPLLMACGARLPARLEWLRAAIGEYIEEEM GHQEWILDDLVACGQAREATVLAGPSLATELLVSYAYDTIQRGNPVGFFGMVLVLEGTSVALATRAANSIAQSLELPRNA FSYLLSHGDLDIEHAGFFEKLMNRLDDPLDQQAVVHAATRFYVLYGDLFRTLRSDGVRLAEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24696; Mature: 24564
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFYASLLAQTQAERERMTQVPIIQAALAGNIARADYVAFLGQAYHHVRHTVPLLMACGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLPARLEWLRAAIGEYIEEEMGHQEWILDDLVACGQAREATVLAGPSLATELLVSYAYDT CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHH IQRGNPVGFFGMVLVLEGTSVALATRAANSIAQSLELPRNAFSYLLSHGDLDIEHAGFFE HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH KLMNRLDDPLDQQAVVHAATRFYVLYGDLFRTLRSDGVRLAEAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure TFYASLLAQTQAERERMTQVPIIQAALAGNIARADYVAFLGQAYHHVRHTVPLLMACGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RLPARLEWLRAAIGEYIEEEMGHQEWILDDLVACGQAREATVLAGPSLATELLVSYAYDT CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHH IQRGNPVGFFGMVLVLEGTSVALATRAANSIAQSLELPRNAFSYLLSHGDLDIEHAGFFE HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH KLMNRLDDPLDQQAVVHAATRFYVLYGDLFRTLRSDGVRLAEAA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA